DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment d and XIF

DIOPT Version :9

Sequence 1:	NP_001188730.1	Gene:	d / 34179	FlyBaseID:	FBgn0262029	Length:	1426	Species:	Drosophila melanogaster
Sequence 2:	NP_001323600.1	Gene:	XIF / 817748	AraportID:	AT2G31900	Length:	1557	Species:	Arabidopsis thaliana

Alignment Length:	823	Identity:	224/823 - (27%)
Similarity:	340/823 - (41%)	Gaps:	171/823 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly   474 DMQDLIHLSGPLTEHAVMRTLQARFNERRYFTNVGPILLSINPYLDVGNPLTLTSTRAM------ 532
            ||..|.:|..|    .|:..|..||.....:|..|.||:::||:..:.:   |.|...|
plant    66 DMTKLAYLHEP----GVLHNLDCRFALNEIYTYTGNILIAVNPFQRLPH---LYSVHMMEQYKGA 123

  Fly   533 ---PLAPQLQKIVQEAVRQQSETGYPQAIILSGTSGAGKTANAMLMLRQLFAIAGGGPETD---A 591
               .|:|.|..:...:.|........|:|::||.||||||....:::|.| |..||..:|:   .
plant   124 AFGELSPHLFAVADTSYRAMINEARSQSILVSGESGAGKTETTKMLMRYL-AFMGGRSDTEGRSV 187

  Fly   592 FKHLAAAFTVLRSLGSAKTTTNSESSRIGQFIEVQV-----TDGALYRTKIHCYFLDQTRVIRPL 651
            .:.:..:..||.:.|:|||..|:.|||.|:|:|:|.     ..||..||    |.|:::||.:..
plant   188 EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGKISGAAIRT----YLLERSRVCQVS 248

  Fly   652 PKEKNYHIFYQLLAGLSREERQKLHLDGYSPANLRYLRGDIGQNEQ--------EDAARFQAWKT 708
            ..|:|||.||.|.|. ..||.:|..:.  .|....||      |:.        :||..:...:.
plant   249 DPERNYHCFYMLCAA-PPEEAKKFKVG--DPRTFHYL------NQTNCYEVSNVDDAREYLETRN 304

  Fly   709 CLGILGI--PFLDVV-RVLAAVLLLGNVQFIDGGGLEV----DVKGETELNSVASLLGVPPAALF 766
            .:.|:||  ...|.: ||:||:|.||||.||.|...:.    |.|....|.:.|.|
plant   305 AMDIVGIGQEAQDAIFRVVAAILHLGNVNFIKGEEADSSKLRDDKSRYHLQTAAEL--------- 360

  Fly   767 RGLTTRTHNVRGQLVKSVCGDGDANMT-----------RDCLAKALYCRTVATIVRRANSLKRLG 820
              |......:...|.|.|....|.|:|           ||.|||.:|.|....||.:.||
plant   361 --LMCNEKMMEDSLCKRVIVTPDGNITKPLDPESAASNRDALAKTVYSRLFDWIVDKINS----- 418

  Fly   821 STLGTLSSDSNESVHNQADVASQHASTIGGGNAGSKSMAALNNAVRHATSDGFIGILDMFGFEEP 885
                        |:....|..|                              .||:||::|||..
plant   419 ------------SIGQDPDAKS------------------------------LIGVLDIYGFESF 441

  Fly   886 SPHAHLEHLCINLCAETMQHFYNTHIFKSSVESCRDEGIVCDTEVDYVDNVPCIDLISSLRTGLL 950
            ..:: .|.|||||..|.:|..:|.|:||...|....|.|.. :.|::|||...:|||.....|::
plant   442 KINS-FEQLCINLTNEKLQQHFNQHVFKMEQEEYTREEINW-SYVEFVDNQDVLDLIEKKPGGII 504

  Fly   951 SMLDAECSV-RGTAESYVTKLKVQHRSSTRLETKPTAEPHDPRMFLIRHFAGRVEYDTTDFLDTN 1014
            ::||..|.. :.|.|::..|:...::...|......|:    ..|.:.|:||.|.|....|||.|
plant   505 ALLDEACMFPKSTHETFAQKMYQTYKGHKRFSKPKLAQ----TAFTVNHYAGDVTYSAEQFLDKN 565

  Fly  1015 RDVVPDDLVGVFYKHTCNFGFATHLFGSELKALYAQQQAPRGLSFRISPTSHSDLLNGDEPVSTL 1079
            :|.|..:...:.....|:  |..:||                      |....| .:.....|::
plant   566 KDYVVAEHQALLDASKCS--FVANLF----------------------PPLPED-ASKQSKFSSI 605

  Fly  1080 TQDFHTRLDNLLRTLVHARPHFVRCIRSNGTEAARSFDRATVVRQIRSLQVLETVNLMASGFPHR 1144
            ...|..:|..|:.||....||::||::.|.......|:...|:.|:|...|||.:.:..:|:|.:
plant   606 GTRFKQQLQALMETLNTTEPHYIRCVKPNAVLKPGIFENDNVLNQLRCGGVLEAIRISCAGYPTK 670

  Fly  1145 MRFKQFNARYRMLAPFRLLRRSEDKALEDCQLIL-KYAMEQPPVLDGSVTLAWAPGKRHVFLSEG 1208
            ..|.:|..|:.|||. .:...|::|:.  |..|. |..::           .:..||..:||..|
plant   671 RAFDEFLDRFVMLAT-DVPEGSDEKSA--CASICNKMGLK-----------GYQIGKTKIFLRAG 721

  Fly  1209 IRQHLEHLRTEIRHKSATLMQATWRGWWWRKKMGNGGAKRSKI 1251
            ....|:..|||:...:..|:|...|.:..||:.  .|.||:.|
plant   722 QMAELDARRTEVLAGATKLIQRQIRTYLTRKEF--LGQKRATI 762

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
d	NP_001188730.1	MYSc	476..1217	CDD:214580	210/785 (27%)
d	NP_001188730.1	MYSc_Myo20	488..1206	CDD:276847	204/762 (27%)
XIF	NP_001323600.1	None

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0160
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D311886at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820