DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment d and MYO19

DIOPT Version :9

Sequence 1:NP_001188730.1 Gene:d / 34179 FlyBaseID:FBgn0262029 Length:1426 Species:Drosophila melanogaster
Sequence 2:XP_011523588.1 Gene:MYO19 / 80179 HGNCID:26234 Length:1047 Species:Homo sapiens


Alignment Length:1130 Identity:270/1130 - (23%)
Similarity:435/1130 - (38%) Gaps:361/1130 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   475 MQDLIHLSGPLTEHAVMRTLQARFNERRYFTNVGPILLSINPYLDVG---NPLTLTSTRAMP--- 533
            :.||..:: |:|...|:|.||||:....::||.|..|:::||:..|.   :|..:....|.|   
Human    37 LDDLTRVN-PVTLETVLRCLQARYMADTFYTNAGCTLVALNPFKPVPQLYSPELMREYHAAPQPQ 100

  Fly   534 --------------------------------LAPQLQKIVQEAVRQQSETGYP--QAIILSGTS 564
                                            |.|.:..:.::..|.......|  |:|::||.|
Human   101 QCGHSESASATACPIGAGRILNHEELTTGQKKLKPHVFTVGEQTYRNVKSLIEPVNQSIVVSGES 165

  Fly   565 GAGKTANAMLMLRQLFAIAGGGPETDAFKHLAAAF--------TVLRSLGSAKTTTNSESSRIGQ 621
            |||||..:..::: .:|:....|.:.....:|...        .|:.:.|:|.|..|:.|||.|:
Human   166 GAGKTWTSRCLMK-FYAVVATSPASWESHKIAERIEQRILNSNPVMEAFGNACTLRNNNSSRFGK 229

  Fly   622 FIEVQVT-----DGALYRTKIHCYFLDQTRVIRPLPKEKNYHIFYQLLAGLSREERQKLHLD--- 678
            ||::|:.     .||..:|    |.|::|||......|:|:|||||:..|.|.:||.:.||.   
Human   230 FIQLQLNRAQQMTGAAVQT----YLLEKTRVACQASSERNFHIFYQICKGASEDERLQWHLPEGA 290

  Fly   679 --GYSPANLRYLRGD-----------IG-----QN-------EQEDAARFQAWKTCLGILGIPFL 718
              .:.|...|.|..|           :|     ||       ||::.....||::..|  | .|.
Human   291 AFSWLPNPERSLEEDCFEVTREAMLHLGIDTPTQNNIFKTAPEQQEGIDRMAWQSRKG--G-HFR 352

  Fly   719 DVV-----------------RVLAAVLLLGNVQF------------IDGGGLEVDVKGETELNSV 754
            :|.                 :|||.:|.|||:||            :|      |.|.|..:.:.
Human   353 EVAMQWKVTLTSRWGLLRHCQVLAGLLHLGNIQFAASEDEAQPCQPMD------DAKCEDSVRTA 411

  Fly   755 ASLLGVPPAALFRGLTTRTHNVRG----QLVKSVCGDGDANMTRDCLAKALYCRTVATIVRRANS 815
            |||||:|...|...:..||  :|.    |:.:..|...:.:..||||||.:|.|....:|     
Human   412 ASLLGLPEDVLLEMVQIRT--IRAGRQQQVFRKPCARAECDTRRDCLAKLIYARLFDWLV----- 469

  Fly   816 LKRLGSTLGTLSSDSNESVHNQADVASQHASTIGGGNAGSKSMAALNNAVRHATSDGFIGILDMF 880
                             ||.|.:..|...:.|.                        |||:||::
Human   470 -----------------SVINSSICADTDSWTT------------------------FIGLLDVY 493

  Fly   881 GFEEPSPHAHLEHLCINLCAETMQHFYNTHIFKSSVESCRDEGIVCDTEVDYVDNVPCIDLISSL 945
            |||. .|...||.||||...|.:|..:..|..::..|....||:.. :.::|.||.||:|||...
Human   494 GFES-FPDNSLEQLCINYANEKLQQHFVAHYLRAQQEEYAVEGLEW-SFINYQDNQPCLDLIEGS 556

  Fly   946 RTGLLSMLDAECSVRGTAESYVTKLKVQHRSSTRLETKPTAEP--------HDPRMFLIRHFAGR 1002
            ...:.|:::.||  |....|...:|:      ||:||.....|        .:| .|::.|:||.
Human   557 PISICSLINEEC--RLNRPSSAAQLQ------TRIETALAGSPCLGHNKLSREP-SFIVVHYAGP 612

  Fly  1003 VEYDTTDFLDTNRDVVPDDLVGVFYKHTCNFGFATHLFGSELKALYAQQQAPRGLSFRISPTSHS 1067
            |.|.|...::.|:|.:|                      .||..|..|.|.|  |...:.||:..
Human   613 VRYHTAGLVEKNKDPIP----------------------PELTRLLQQSQDP--LLMGLFPTNPK 653

  Fly  1068 DLLNGD------EPVSTLTQDFHTRLDNLLRTLVHARPHFVRCIRSNGTEAARSFDRATVVRQIR 1126
            :....:      .||.|:...|...|:.||:.|....||::|||:.|....|::|.:..|:.|:.
Human   654 EKTQEEPPGQSRAPVLTVVSKFKASLEQLLQVLHSTTPHYIRCIKPNSQGQAQTFLQEEVLSQLE 718

  Fly  1127 SLQVLETVNLMASGFPHRMRFKQFNARYRML------------APF------RLLRRSEDKALED 1173
            :..::||:::.|:|||.|:..:.|..||::|            :|:      .....||:..||.
Human   719 ACGLVETIHISAAGFPIRVSHRNFVERYKLLRRLHPCTSSGPDSPYPAKGLPEWCPHSEEATLEP 783

  Fly  1174 CQLILKYAMEQPPVLDGSVTLAW-------AP---GKRHVFLSEGIRQHLE-------------- 1214
               :::..:...|||..:..:..       ||   |:..||:::.:.:.||              
Human   784 ---LIQDILHTLPVLTQAAAITGDSAEAMPAPMHCGRTKVFMTDSMLELLECGRARVLEQCARCI 845

  Fly  1215 --------HLRTEIRHKSATLMQATWRGW-------------------W--WRKKMGNGGAKRSK 1250
                    |...|.:.::..|:||..|.|                   |  ||.:|....||  :
Human   846 QGGWRRHRHREQERQWRAVMLIQAAIRSWLTRKHIQRLHAAATVIKRAWQKWRIRMACLAAK--E 908

  Fly  1251 IPGLQ-----QAPLPNNKTTPNSAAQNKAASSTMAALAAVAAAAPISVPRLSAKTTSLGIG---- 1306
            :.|::     |||.    :...|..|.:       .|.|:....|:.   |....|::|:|    
Human   909 LDGVEEKHFSQAPC----SLSTSPLQTR-------LLEAIIRLWPLG---LVLANTAMGVGSFQR 959

  Fly  1307 -----GTVARPRPQP----------------IAGTPPPDPQEKCDQKIIQ--QTCNLFGLDLERP 1348
                 ..:..||..|                |...|....:..|.:..::  ..|         |
Human   960 KLVVWACLQLPRGSPSSYTVQTAQDQAGVTSIRALPQGSIKFHCRKSPLRYADIC---------P 1015

  Fly  1349 PPVPPSRSYTITGNSKISYPQNRVM 1373
            .|.|    |:|||.::|...::|::
Human  1016 EPSP----YSITGFNQILLERHRLI 1036

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dNP_001188730.1 MYSc 476..1217 CDD:214580 229/918 (25%)
MYSc_Myo20 488..1206 CDD:276847 222/873 (25%)
MYO19XP_011523588.1 MYSc_Myo19 49..823 CDD:276846 222/873 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0160
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D311886at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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