DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment d and Myh10

DIOPT Version :9

Sequence 1:NP_001188730.1 Gene:d / 34179 FlyBaseID:FBgn0262029 Length:1426 Species:Drosophila melanogaster
Sequence 2:XP_006534552.1 Gene:Myh10 / 77579 MGIID:1930780 Length:2007 Species:Mus musculus


Alignment Length:909 Identity:242/909 - (26%)
Similarity:389/909 - (42%) Gaps:167/909 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   427 SQQLPFIPQSKHTNPCQSVKTLPFGFGFSESQQKMQQQQQQGNSSPKDMQDLIHLSGP------- 484
            :::|.:||..:|.....|:|.       ....:.|.:..:.|..:..:..|:..::.|       
Mouse    32 AKKLVWIPSERHGFEAASIKE-------ERGDEVMVELAENGKKAMVNKDDIQKMNPPKFSKVED 89

  Fly   485 ------LTEHAVMRTLQARFNERRYFTNVGPILLSINPYLDVGNPLTLTSTRAM-------PLAP 536
                  |.|.:|:..|:.|:.....:|..|...:.||||.::  |:...:...|       .:.|
Mouse    90 MAELTCLNEASVLHNLKDRYYSGLIYTYSGLFCVVINPYKNL--PIYSENIIEMYRGKKRHEMPP 152

  Fly   537 QLQKIVQEAVRQQSETGYPQAIILSGTSGAGKTANAMLMLRQLFAIAGG---------------- 585
            .:..|.:.|.|...:....|:|:.:|.||||||.|...:::.|..:|..                
Mouse   153 HIYAISESAYRCMLQDREDQSILCTGESGAGKTENTKKVIQYLAHVASSHKGRKDHNIPQESPKP 217

  Fly   586 -GPETDAFKHLAAAFTVLRSLGSAKTTTNSESSRIGQFIEV--QVTDGALYRTKIHCYFLDQTRV 647
             .|:.:..:.|..|..:|.|.|:|||..|..|||.|:||.:  .|| |.:....|..|.|:::|.
Mouse   218 VKPQGELERQLLQANPILESFGNAKTVKNDNSSRFGKFIRINFDVT-GYIVGANIETYLLEKSRA 281

  Fly   648 IRPLPKEKNYHIFYQLLAGLSREERQKLHLDGYSPANLRYL-RGDIGQNEQEDAARFQAWKTCLG 711
            :|....|:.:|||||||:|.....:..|.|:|::  |.|:| .|.|....|:|...||.....:.
Mouse   282 VRQAKDERTFHIFYQLLSGAGEHLKSDLLLEGFN--NYRFLSNGYIPIPGQQDKDNFQETMEAMH 344

  Fly   712 ILGI---PFLDVVRVLAAVLLLGNVQF-----IDGGGLEVDVKGETELNSVASLLGVPPAALFRG 768
            |:|.   ..|.:::|:::||..||:.|     .|    :..:...|....:..|||:......|.
Mouse   345 IMGFSHEEILSMLKVVSSVLQFGNISFKKERNTD----QASMPENTVAQKLCHLLGMNVMEFTRA 405

  Fly   769 LTTRTHNVRGQLVKSVCGDGDANMTRDCLAKALYCRTVATIVRRANSLKRLGSTLGTLSSDSNES 833
            :.|....|....|:.......|:...:.||||.|.|....:|.|.|.                  
Mouse   406 ILTPRIKVGRDYVQKAQTKEQADFAVEALAKATYERLFRWLVHRINK------------------ 452

  Fly   834 VHNQADVASQHASTIGGGNAGSKSMAALNNAVRHATSDGFIGILDMFGFEEPSPHAHLEHLCINL 898
                                      ||:...|...|  ||||||:.|||....:: .|.||||.
Mouse   453 --------------------------ALDRTKRQGAS--FIGILDIAGFEIFELNS-FEQLCINY 488

  Fly   899 CAETMQHFYNTHIFKSSVESCRDEGIVCDTEVDY-VDNVPCIDLIS--SLRTGLLSMLDAEC-SV 959
            ..|.:|..:|..:|....|..:.|||..:. :|: :|..||||||.  :...|:|::||.|| ..
Mouse   489 TNEKLQQLFNHTMFILEQEEYQREGIEWNF-IDFGLDLQPCIDLIERPANPPGVLALLDEECWFP 552

  Fly   960 RGTAESYVTKLKVQHRSSTRLETKPTAEPHDPRMFLIRHFAGRVEYDTTDFLDTNRDVVPDDLVG 1024
            :.|.:::|.|| ||.:.|.....|| .:..|...|.|.|:||:|:|...::|..|.|.:.|::..
Mouse   553 KATDKTFVEKL-VQEQGSHSKFQKP-RQLKDKADFCIIHYAGKVDYKADEWLMKNMDPLNDNVAT 615

  Fly  1025 VFYKHTCNFGFATHLFGSELKALYAQQQAPRGLSFRISPTS-HS---DLLNGDEPVSTLTQD--- 1082
            :.  |..:..|...|:..|::.:   |:|    ||..|.:. |.   |.:.|.:.|:.:|:.   
Mouse   616 LL--HQSSDRFVAELWKDEIQTI---QRA----SFYDSVSGLHEPPVDRIVGLDQVTGMTETAFG 671

  Fly  1083 ---------FHT-------RLDNLLRTLVHARPHFVRCIRSNGTEAARSFDRATVVRQIRSLQVL 1131
                     |.|       .|..|:.||.:..|:|||||..|..:.|...|...|:.|:|...||
Mouse   672 SAYKTKKGMFRTVGQLYKESLTKLMATLRNTNPNFVRCIIPNHEKRAGKLDPHLVLDQLRCNGVL 736

  Fly  1132 ETVNLMASGFPHRMRFKQFNARYRMLAPFRLLRRSEDKALEDCQLILKYAMEQPPVLDGSVTLAW 1196
            |.:.:...|||:|:.|::|..||.:|.|..:.:...| ..:.|:.::: |:|..|.|       :
Mouse   737 EGIRICRQGFPNRIVFQEFRQRYEILTPNAIPKGFMD-GKQACERMIR-ALELDPNL-------Y 792

  Fly  1197 APGKRHVFLSEGIRQHLEHLR----TEIRHKSATLMQATWRGWWWRKKMGNGGAKRSKIPGLQQ 1256
            ..|:..:|...|:..|||..|    |:|    ....||..||:..||.......:.|.:..||:
Mouse   793 RIGQSKIFFRAGVLAHLEEERDLKITDI----IIFFQAVCRGYLARKAFAKKQQQLSALKVLQR 852

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dNP_001188730.1 MYSc 476..1217 CDD:214580 222/815 (27%)
MYSc_Myo20 488..1206 CDD:276847 214/779 (27%)
Myh10XP_006534552.1 Myosin_N 33..72 CDD:397036 8/45 (18%)
MYSc_Myh10 99..802 CDD:276952 214/779 (27%)
Myosin_tail_1 879..1959 CDD:396244
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0160
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

Return to query results.
Submit another query.