DRSC/TRiP Functional Genomics Resources

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Protein Alignment d and myo19

DIOPT Version :9

Sequence 1:NP_001188730.1 Gene:d / 34179 FlyBaseID:FBgn0262029 Length:1426 Species:Drosophila melanogaster
Sequence 2:NP_001122117.1 Gene:myo19 / 734140 XenbaseID:XB-GENE-999897 Length:969 Species:Xenopus tropicalis


Alignment Length:1097 Identity:274/1097 - (24%)
Similarity:446/1097 - (40%) Gaps:301/1097 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   456 ESQQKMQQQQQQGNSSPKDM------QDLIHL------SGPLTEHAVMRTLQARFNERRYFTNVG 508
            :.|..:....:..||..:::      :..:||      ..|:|...|::.||||::...::||.|
 Frog    13 QKQNNLSNNNKLNNSFEEEVKAFLIDEKQLHLYDDLTKVNPVTTATVLKCLQARYSAGVFYTNAG 77

  Fly   509 PILLSINPYLDVGNPLTLTSTRAM-----------------PLAPQLQKIVQEAVRQQSETGYPQ 556
            ..::::||:..|   ..|.|:..|                 .:|.|..|.||..::..:     |
 Frog    78 CTVVAVNPFRPV---CKLYSSEVMKEYHAASNPQGCKPHIFTVAEQAYKNVQSQIQPVN-----Q 134

  Fly   557 AIILSGTSGAGKTANAMLMLRQLFAIAG-------------------GGPETDAFKHLAAAFTVL 602
            :||:||.||||||..:..:::....::.                   ..|..:||          
 Frog   135 SIIVSGESGAGKTWTSRCLMKFYATVSASRCYITNEMVERIESRVLDSNPVMEAF---------- 189

  Fly   603 RSLGSAKTTTNSESSRIGQFIEVQVTDGALYRTK------IHCYFLDQTRVIRPLPKEKNYHIFY 661
               |:|.|..|..|||.|::|::|     |.||:      |..|.|::|||....|.|:|:||||
 Frog   190 ---GNACTLRNHNSSRFGKYIQLQ-----LNRTQQITGASIQTYLLEKTRVAHQAPLERNFHIFY 246

  Fly   662 QLLAGLSREERQKLHLDGYSPANLRYLRGDIGQNEQEDAARFQAWKTCLGILGIPFL---DVVRV 723
            |::.|.||.||::.:|.  ..||..:|.......|::|   |:..|..:..|||...   ::.::
 Frog   247 QVVKGASRHEREEWNLP--EKANFSWLPNYENNLEEDD---FEVTKDAMLHLGIDQTTQNNIFKI 306

  Fly   724 LAAVLLLGNVQFIDGGGLEVDVKGETE-LN------SV-ASLLGVPPAALFRGLTTRTHNV-RGQ 779
            |:.:|.|||:||.|    .||.....| ||      || ||||.:|.:.|...|:.||... :.|
 Frog   307 LSGLLHLGNIQFSD----SVDESQPCEPLNYTQEFASVAASLLKIPVSHLLERLSIRTITAGKQQ 367

  Fly   780 LVKSVCGDGDANMTRDCLAKALYCRT---VATIVRRANSLKRLGSTLGTLSSDSNESVHNQADVA 841
            :.|..|...:.:..||||||.:|.|.   :.|::                    ||::..:|   
 Frog   368 VFKKPCRKSECDTRRDCLAKTIYARLFEWLVTVI--------------------NENICAEA--- 409

  Fly   842 SQHASTIGGGNAGSKSMAALNNAVRHATSDGFIGILDMFGFEEPSPHAHLEHLCINLCAETMQHF 906
                             ...||         |||:||::|||. .|..:||.||||...|.:|..
 Frog   410 -----------------YRWNN---------FIGLLDVYGFES-FPENNLEQLCINYANEKLQQH 447

  Fly   907 YNTHIFKSSVESCRDEGIVCDTEVDYVDNVPCIDLISSLRTGLLSMLDAEC-----SVRGTAESY 966
            :.:|..||..:....||:.. :.:.|.||..|:|||......:.|:|:.||     |..|..:|.
 Frog   448 FVSHYLKSQQDEYAAEGLEW-SFISYQDNQSCVDLIEGSPISIFSLLNEECRLNRSSDAGQLQSR 511

  Fly   967 VTKLKVQHRSSTRLETKPTAEPHDPRMFLIRHFAGRVEYDTTDFLDTNRDVVPDDLVGVFYKHTC 1031
            :.|....::|..|  .|.:.:|:    |::.|:||:|:|...|..:.|:|.||.:|:.:..:.. 
 Frog   512 LEKALSHNKSIGR--DKFSKKPN----FIVSHYAGKVQYQIEDMAEKNKDPVPPELIQLLQESD- 569

  Fly  1032 NFGFATHLFGSELKALYAQQQAPRGLSFRISPTSHSDLLNGDEPV----------STLTQDFHTR 1086
                 .||    |:.|:.                    :..::||          .|:...|...
 Frog   570 -----DHL----LQILFP--------------------VENNKPVYGATNNRAVGVTVVSKFKGS 605

  Fly  1087 LDNLLRTLVHARPHFVRCIRSNGTEAARSFDRATVVRQIRSLQVLETVNLMASGFPHRMRFKQFN 1151
            |::|::.|....||::|||:.|....|..|.:..|:.|:.:..::||:|:.|:|||.|:.|:.|.
 Frog   606 LESLMQILHSTTPHYIRCIKPNVDCQALVFRQEEVLMQLEACGIVETINISAAGFPIRISFESFV 670

  Fly  1152 ARYRMLAPFRL-----------LRRSE-----DKALEDCQLILKYAMEQPPVLDGSV--TLAWAP 1198
            .||.::||.::           |::.:     |:.....|.|| :|:......|.::  ||... 
 Frog   671 ERYSVIAPRQIHMENNFNDCLFLKKKQGFEKTDQLPSKLQTIL-HAVLSKLCKDSTLSNTLVHC- 733

  Fly  1199 GKRHVFLSEGIRQHLEHLRTEIRHKSATLMQATWRGWWWRKKMGNGGAKRSKIPGLQQAPLPNNK 1263
            |...|||:..:.:.||..|.|.....|..:|..||.:..||.     ||:::.....||.:....
 Frog   734 GTTKVFLTHLMVELLEERRLEAICSKAVCIQCCWRRYRQRKL-----AKQNRAATTIQAAVKGWL 793

  Fly  1264 TTPNSAAQNKAAS----------STMAALAA---------VAAAAPISVPRLSAKTTSLGIGGTV 1309
            |.......:.||:          ..|.||||         |.....:|||....||..       
 Frog   794 TKKYIERMHNAATVIKRIWKKWKEKMEALAAAELDDSIEDVERTLLLSVPASPVKTLE------- 851

  Fly  1310 ARPRPQPIAGTPPPDPQEKCDQKIIQQTCNL----FGLDLERPPPVPPSRSYTITGNSKISYPQN 1370
                          .|:.....|::..:..|    .||.|.:.|.:   |.| |....::...||
 Frog   852 --------------SPKTNLQDKLLTHSAILKFGTLGLVLYKAPAI---RKY-IVETDELKRNQN 898

  Fly  1371 RVMKMN-------FPEEGQSEAPQLKKGEAVTVVGASTVR----GHLMVEHKGQSFH 1416
            .:|.:|       :......|.|           |.:::|    |.:...:|....|
 Frog   899 ILMCLNVLHRNNRYKVTANCEEP-----------GITSIRARPQGSIRFHYKRSPLH 944

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dNP_001188730.1 MYSc 476..1217 CDD:214580 224/836 (27%)
MYSc_Myo20 488..1206 CDD:276847 217/807 (27%)
myo19NP_001122117.1 MYSc 45..752 CDD:214580 222/830 (27%)
MYSc_Myo19 57..741 CDD:276846 217/807 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D311886at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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