DRSC/TRiP Functional Genomics Resources

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Protein Alignment d and myo5b

DIOPT Version :9

Sequence 1:NP_001188730.1 Gene:d / 34179 FlyBaseID:FBgn0262029 Length:1426 Species:Drosophila melanogaster
Sequence 2:XP_021324561.1 Gene:myo5b / 567402 ZFINID:ZDB-GENE-031219-7 Length:1840 Species:Danio rerio


Alignment Length:801 Identity:234/801 - (29%)
Similarity:368/801 - (45%) Gaps:134/801 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   477 DLIHLSGPLTEHAVMRTLQARFNERRY-FTNVGPILLSINPY--LDVGNPLTLTSTRAMPLA--- 535
            ||..|| .|.|.||:..|:.||.|..: :|..|.:|::||||  |.:.....:.:.....:.   
Zfish    73 DLTALS-YLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLHIYGEEVINAYSGQNMGDMD 136

  Fly   536 PQLQKIVQEAVRQQSETGYPQAIILSGTSGAGKTANAMLMLRQLFAIAGGGPETDAFKHLAAAFT 600
            |.:..:.:||.:|.:.....|:||:||.||||||.:|...:|....:.|...:|:..:.:.|:..
Zfish   137 PHIFAVAEEAFKQMARDEKNQSIIVSGESGAGKTVSAKYAMRFFATVGGSANDTNVEEKVLASSP 201

  Fly   601 VLRSLGSAKTTTNSESSRIGQFIEVQVTD-----GALYRTKIHCYFLDQTRVIRPLPKEKNYHIF 660
            ::.::|:||||.|..|||.|::|::....     ||..||    |.|:::||:....:|:|||||
Zfish   202 IMEAIGNAKTTRNDNSSRFGKYIQIGFDRRYHIIGANMRT----YLLEKSRVVFQAEEERNYHIF 262

  Fly   661 YQLLAGLSREERQKLHLDGYSPANLRYLRGDI---GQNEQEDAARFQAWKTCLGILGIPFLDVVR 722
            |||.|..|..|.:.|.|..........|..:|   |.|:.||..:.:...|.||:.....:.:.:
Zfish   263 YQLCASCSLPEFKDLTLTSAEDFTYTSLGENIFIEGVNDAEDLVKTREALTMLGVKENHQMSIFK 327

  Fly   723 VLAAVLLLGNVQFI---DGGGLEVDVKGETELNSVASLLGVPPAALFRGL-------TTRTHNVR 777
            ::|::|.||||:.:   ||....:: :.:|.|:....|||:....:...|       |:.|:   
Zfish   328 IIASILHLGNVEIVQERDGESCHIN-RNDTHLHHFCRLLGIEQEQMENWLCRRKLVTTSETY--- 388

  Fly   778 GQLVKSVCGDGDANMTRDCLAKALYCRTVATIVRRANSLKRLGSTLGTLSSDSNESVHNQADVAS 842
               ||::......| .||.|||.:|......||...                 |:|:|..   ..
Zfish   389 ---VKNMPHSQAVN-ARDALAKHIYAHLFDWIVEHI-----------------NKSLHTS---TK 429

  Fly   843 QHASTIGGGNAGSKSMAALNNAVRHATSDGFIGILDMFGFEEPSPHAHLEHLCINLCAETMQHFY 907
            ||:                           |||:||::|||....:: .|..|||...|.:|..:
Zfish   430 QHS---------------------------FIGVLDIYGFETFEINS-FEQFCINYANEKLQQQF 466

  Fly   908 NTHIFKSSVESCRDEGIVCDTEVDYVDNVPCIDLISSLRTGLLSMLDAECSV-RGTAESYVTKLK 971
            |:|:||...|....|.|.. |.:|:.||.||||||.: :.|:|.:||.||.| :||.:::..||.
Zfish   467 NSHVFKLEQEEYMKEQIPW-TLIDFYDNQPCIDLIEA-KLGILDLLDEECKVPKGTDQNWAQKLY 529

  Fly   972 VQHRSSTRLETKPTAEPHDPRM----FLIRHFAGRVEYDTTDFLDTNRDVVPDDLVGVFYKHTCN 1032
            .:|..|...|        .|||    |::.|||.:|||....||:.|||.|.::.:.:.  ....
Zfish   530 SKHSGSGHFE--------KPRMSNKSFIVVHFADKVEYQCDGFLEKNRDTVYEEQINIL--KASK 584

  Fly  1033 FGFATHLF----------GSELKALYAQQQAPRGLSFRISPTSHSDLLNGDEPVSTLTQDFHTRL 1087
            |.....||          ||:...:..:...|       :|..|:     .|...|:...|...|
Zfish   585 FQLVADLFDDAKDAAPHPGSKTSRINVRPAKP-------APKGHN-----REHRKTVGTQFRNSL 637

  Fly  1088 DNLLRTLVHARPHFVRCIRSNGTEAARSFDRATVVRQIRSLQVLETVNLMASGFPHRMRFKQFNA 1152
            ..|:.||....||:||||:.|..:.:..||....|:|:|:..||||:.:.|:|:|.|..:..|.:
Zfish   638 HLLMETLNATTPHYVRCIKPNDYKESFVFDSRRAVQQLRACGVLETIRISAAGYPSRWTYPDFFS 702

  Fly  1153 RYRMLAPFRLLRRSEDKALEDCQLILKYAMEQPPVLDGSVTLAWAPGKRHVFLSEGIRQHLEHLR 1217
            |||:|...:.|...:.|.:  |:.:|:..::.|.        .:..||..:|...|...:||.||
Zfish   703 RYRVLMTKKDLSVGDKKQV--CKNLLEILIKDPD--------KFQFGKTKIFFRAGQVAYLEKLR 757

  Fly  1218 TEIRHKSATLMQATWRGWWWR 1238
            .:....:...:|.|.|||..|
Zfish   758 ADKFRFACIKIQKTVRGWLQR 778

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dNP_001188730.1 MYSc 476..1217 CDD:214580 226/778 (29%)
MYSc_Myo20 488..1206 CDD:276847 217/756 (29%)
myo5bXP_021324561.1 Myosin_head 7..1371 CDD:332202 234/801 (29%)
MYSc_Myo5 83..746 CDD:276831 217/756 (29%)
Myo5b_CBD 1461..1835 CDD:271261
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0160
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D311886at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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