DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment d and Myo1g

DIOPT Version :9

Sequence 1:NP_001188730.1 Gene:d / 34179 FlyBaseID:FBgn0262029 Length:1426 Species:Drosophila melanogaster
Sequence 2:XP_006514763.1 Gene:Myo1g / 246177 MGIID:1927091 Length:1039 Species:Mus musculus


Alignment Length:886 Identity:227/886 - (25%)
Similarity:350/886 - (39%) Gaps:175/886 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   497 RFNERRYFTNVGPILLSINPY--LDVGNPLTLTSTRAMPL---APQLQKIVQEAVRQQSETGYPQ 556
            :|.:.|.:|.:|.:|:|:|||  |.:..|..:...:...|   .|.|..:...|.:.........
Mouse    53 KFEKGRIYTYIGEVLVSVNPYQELPLYGPEAIAKYQGRELYERPPHLYAVANAAYKAMKRRSRDT 117

  Fly   557 AIILSGTSGAGKTANAMLMLRQLFAIAGGG--PETDAFKHLAAAFT-VLRSLGSAKTTTNSESSR 618
            .|::||.||||||..:..:::.:.|:....  .|.:..|::....| ||.:.|:|:|..|..|||
Mouse   118 CIVISGESGAGKTEASKHIMQYIAAVTNPSQRAEVERVKNVLLKSTCVLEAFGNARTNRNHNSSR 182

  Fly   619 IGQFIEVQVT-DGALYRTKIHCYFLDQTRVIRPLPKEKNYHIFYQLLAGLSREERQKLHLDGYSP 682
            .|:::::... .|......||.|.|:::||::....|:|:|.|||||.|...:|.|.|||: .:|
Mouse   183 FGKYMDINFDFKGDPVGGHIHSYLLEKSRVLKQHVGERNFHAFYQLLRGSEDQELQGLHLE-RNP 246

  Fly   683 ANLRYLRGDIGQNE------QEDAARFQAWKTCLGILGI---PFLDVVRVLAAVLLLGNVQFID- 737
            |...:.|...|.|.      ..|....|.....:.|:|.   ....:.|:|||:|.|||::|:: 
Mouse   247 AVYNFTRQGAGLNMGVHNALDSDEKSHQGVMEAMRIIGFSPDEVESIHRILAAILHLGNIEFVET 311

  Fly   738 ------GGGLEVDVKGETELNSVASLLGVPPAALFRGLTTRTHNVRG-QLVKSVCGDGDANMTRD 795
                  .||||  |..|..:..||.|...|...:.|.|..||....| ::::......:|:..||
Mouse   312 EENGPQKGGLE--VADEALVGYVAKLTATPRDLVLRTLLARTVASGGREVIEKSHTVAEASYARD 374

  Fly   796 CLAKALYCRTVATIVRRANSLKRLGSTLGTLSSDSNESVHNQADVASQHASTIGGGNAGSKSMAA 860
            ..|||:|.|....:|.:.||:                                         |..
Mouse   375 ACAKAMYQRLFEWVVNKINSI-----------------------------------------MEP 398

  Fly   861 LNNAVRHATSDGFIGILDMFGFEEPSPHAHLEHLCINLCAETMQHFYNTHIFKSSVESCRDEGIV 925
            .|...|....|..||:||::|| |..|....|..|||.|.|.:|..:...|.|...|....|||.
Mouse   399 RNRDPRCDGKDTVIGVLDIYGF-EVFPVNSFEQFCINYCNEKLQQLFIQLILKQEQEEYEREGIA 462

  Fly   926 CDTEVDYVDNVPCIDLISSLRTGLLSMLDAECSVRG--TAESYVTKLKVQHRSSTRLETKPTAEP 988
            ..| ::|.:|...::|:.....|:|::||..||..|  |...::..|...||......::... |
Mouse   463 WQT-IEYFNNATIVELVEQPHRGILAVLDEACSTAGPITDRIFLQTLDTHHRHHPHYSSRQLC-P 525

  Fly   989 HDPRM-----FLIRHFAGRVEYDTTDFLDTNRDVVPDDLVGVFYKHTCNFGFATHLFGSELKALY 1048
            .|..|     |.|:|:||.|.|....|:|.|||.:..|...:.|.                    
Mouse   526 TDKTMEFGRDFQIKHYAGDVTYSVEGFIDKNRDSLFQDFKRLLYN-------------------- 570

  Fly  1049 AQQQAPRGLSFRISPTSHSDLLNGDEPVSTLTQD-------FHTRLDNLLRTLVHARPHFVRCIR 1106
                       .:.||..:...:|.:.::.:|:.       |...:..|:..|....|.:||||:
Mouse   571 -----------SVDPTLRAMWPDGQQDITEVTKRPLTAGTLFKNSMVALVENLASKEPFYVRCIK 624

  Fly  1107 SNGTEAARSFDRATVVRQIRSLQVLETVNLMASGFPHRMRFKQFNARYRMLA----PFRLLRRSE 1167
            .|..:.|...|.|....|:..|.:||.|.:..:||..|..:.:|..||:|..    |..||....
Mouse   625 PNEDKVAGRLDEAHCRHQVEYLGLLENVRVRRAGFASRQPYPRFLLRYKMTCEYTWPNHLLGSDR 689

  Fly  1168 DKALEDCQLILKYAMEQPPVLDGSVTLAWAPGKRHVFL-SEGIRQHLEHLRTEIRHKSATLMQAT 1231
            |..         .|:.:...|.|.|    |.|...:|: |......||..|..:......|:|..
Mouse   690 DAV---------SALLEQHGLQGDV----AFGHSKLFIRSPRTLVTLEQSRARLIPIIVLLLQKA 741

  Fly  1232 WRG------------------WWWRKKMGNGGAKRSKIPGLQ-------QAPLPNNK---TTPNS 1268
            |||                  |:.|.|:      |:.:..||       |.||....   .||.:
Mouse   742 WRGTLARWHCRRLRAIYTIMRWFRRHKV------RAHLIELQRRFQAARQPPLYGRDLVWPTPPA 800

  Fly  1269 AAQN-----KAASSTMAALAAVAAAAPISVPRLSAKTTSLG 1304
            ..|.     :...|...|...|....|..:.::.||..::|
Mouse   801 VLQPFQDTCRVLFSRWRARQLVKNIPPSDMIQIKAKVAAMG 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dNP_001188730.1 MYSc 476..1217 CDD:214580 202/764 (26%)
MYSc_Myo20 488..1206 CDD:276847 199/753 (26%)
Myo1gXP_006514763.1 MYSc_Myo1 52..715 CDD:276829 199/752 (26%)
Myosin_TH1 836..1007 CDD:368706 2/6 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0160
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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