DRSC/TRiP Functional Genomics Resources

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Protein Alignment prg and si:ch211-148l7.4

DIOPT Version :10

Sequence 1:NP_609232.2 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001352164.1 Gene:si:ch211-148l7.4 / 563603 ZFINID:ZDB-GENE-090313-38 Length:499 Species:Danio rerio


Alignment Length:407 Identity:77/407 - (18%)
Similarity:124/407 - (30%) Gaps:148/407 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 DAAQMAAQQSVANNANTTEARPKRAFLCQYCDLGFTLPAECQEHELAAHDPNAPYCCNFCNIKLV 247
            ||:|..::.:........|...::...||.|:..|.|.:..|.|:.    |.:...|..||.|:.
Zfish    73 DASQKPSEMNALVRHQQKERTLQKLHSCQRCNQQFALLSSLQLHKC----PRSLSVCQTCNGKMP 133

  Fly   248 ---------TRPALISHIK-TLHDPDRPYVCAHCRKGFVRRSDLKKH----------TIVHTGVR 292
                     ::|::.:..: .:|..:.|     |.:.|..:.||..|          |:....:.
Zfish   134 KGSSCASCGSKPSVPNCTEDPIHQGNSP-----CGQAFSHKQDLLHHQQAGDCQPANTLKAASLP 193

  Fly   293 PF----TCNVCSKSFSRNTNLTKHMRIHSGVKPFVCQQCPRSFQTAVEMMRH----TRSHGEVKA 349
            ||    ||.:|||:|.....|..|||.         ...||.....:|...|    .|:.....|
Zfish   194 PFKQKATCTLCSKTFRAPRGLACHMRF---------SHAPRKRSANLEKDVHFGNMERNESVSSA 249

  Fly   350 -FQCGRCPYSFSRRDKLIAHQQVHTRRDMEQQQQMGLIPPMEGDLQQQALQAKQKAAAQTKNSRY 413
             |||..|..|||:...|..|::...|||::               .:...:...|...:.:.|..
Zfish   250 LFQCRSCDKSFSKTSLLHRHRKEEHRRDVK---------------VRNTFRNSGKITRRKRKSGI 299

  Fly   414 YHCDVCDRTFQRE-------RDLQRHQALHM---------------------------------- 437
            |.|..|...|...       |:...|..:|:                                  
Zfish   300 YPCLHCGAEFLHHLTRLAHFRNYTVHHEMHLKLSNKSTGVYATAAKLKLKPARKLQKDKPEGKKG 364

  Fly   438 -----------------------------------DSLFACKTCNQGFNRREQLQRHELEAHG-- 465
                                               |:.:.|.:|:|.|:....|..|| :.|.  
Zfish   365 RPKKVLPVHIEETKEEEEVEENTLEDDSDDDEEDEDAEYPCTSCDQVFSSTAALFVHE-KIHDQL 428

  Fly   466 -------PSFTCGICCI 475
                   |:.||..|.:
Zfish   429 PAEVDDEPAETCRCCSV 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prgNP_609232.2 zf-AD 16..94 CDD:462262
COG5048 <212..340 CDD:227381 34/151 (23%)
C2H2 Zn finger 239..260 CDD:275368 5/30 (17%)
C2H2 Zn finger 268..288 CDD:275368 6/29 (21%)
C2H2 Zn finger 296..316 CDD:275368 9/19 (47%)
C2H2 Zn finger 324..344 CDD:275368 5/23 (22%)
C2H2 Zn finger 352..372 CDD:275368 7/19 (37%)
C2H2 Zn finger 416..436 CDD:275368 5/26 (19%)
C2H2 Zn finger 443..464 CDD:275368 7/20 (35%)
C2H2 Zn finger 470..490 CDD:275368 2/6 (33%)
si:ch211-148l7.4NP_001352164.1 C2H2 Zn finger 201..222 CDD:275368 9/29 (31%)
C2H2 Zn finger 253..271 CDD:275368 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.

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