DRSC/TRiP Functional Genomics Resources

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Protein Alignment prg and LOC563292

DIOPT Version :10

Sequence 1:NP_609232.2 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster
Sequence 2:XP_691749.6 Gene:LOC563292 / 563292 -ID:- Length:749 Species:Danio rerio


Alignment Length:777 Identity:140/777 - (18%)
Similarity:216/777 - (27%) Gaps:359/777 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DQDVSTCRLCHHNTDPNSL-------NIFDD-----TVQFCKDVSIAEVSKSLWSVQYDRNECLS 63
            |::|:  ||...:.:|..:       ...||     .|:..:.|.::||.....|||        
Zfish     2 DEEVT--RLALRSQEPKIILHGSDEGGAGDDEEEEYVVELQETVLVSEVEGEGASVQ-------- 56

  Fly    64 ELICSRCLEILEEAFELRKGMQEREQSLQEQLKEMIKDHPKHRPGLNGNPGVFV----------- 117
                               |....|..:|:.:::::.::..    .:.:.||.|           
Zfish    57 -------------------GFSSDELVIQDAVEDVVAEYVH----CDDDEGVAVETCVMSLEGEE 98

  Fly   118 PEEGCIIVEVDPENLAESSEEEFALGSDGEYENYDDDD--------------EEEEEDYDEEDEE 168
            .|:|..:.|:..:.|.|..|:|....|.|:|.....||              |...:|.:.|.:|
Zfish    99 EEDGVAMAEMTEDVLVEGREQEHDSDSCGDYLMISLDDAGKMVSGDGDEVTVEGAIDDQEVEKDE 163

  Fly   169 DGQN----------------GEDVD---------------------------------------- 177
            |||.                ||.||                                        
Zfish   164 DGQEVIKVYIFKADSGEDDLGETVDLGENETVALAEPVVRPLREKIYMSVGDGHHTQTDGGSKLS 228

  Fly   178 ------------------------------MPLGMDAAQMAAQQSVAN----------------- 195
                                          ||:...||...|.:...|                 
Zfish   229 DEVYMEVVVGGEEPVPHDRPYDSTALSKDFMPVAWAAAYAGADEGCENRNGAASALLHIDESDAL 293

  Fly   196 -------NANTTEARPK-----------------------------RAFL--------------- 209
                   ..|...|.|:                             |.||               
Zfish   294 DKLNRQHGKNRRRAEPRQVQTAIIIGPYGQPLTVYPCMLCGKKFKSRGFLKRHTRNHHQDVLTRK 358

  Fly   210 ---CQYCD-----------------LGFTLPAECQ-------------EHELAAH---------- 231
               |..||                 |....|.||:             .|.|..|          
Zfish   359 KYQCTDCDFTTNKKASLHNHMEVHALSNKAPFECETCGKEFHQQAALFSHRLQHHHREQKTPTAI 423

  Fly   232 -------DPNAPYCCNFCNIKLVTRPALISHIKTLHDPDRPYVCAHCRKGFVRRSDLKKHTIVHT 289
                   ..|..:.|.||:.:...:..|..|:..:|....|::|..|.|||...|:||||...||
Zfish   424 ASPLPPATANKTHKCKFCDYETAEQGLLNRHLLAVHSKSFPHICVECGKGFRHPSELKKHMRTHT 488

  Fly   290 GVRPFTCNVCSKSFSRNTNLTKHMRI-HSGVKPFVCQQCPRSFQTAVEMMRHTRSHGEVKAFQCG 353
            |.:|::|..|....:.::||..|::. ||...||.|::|.::|....|:.:|..:|.:.:..||.
Zfish   489 GEKPYSCMYCDYKSADSSNLKTHVKTKHSRELPFRCERCGQTFAEEEELTQHATTHDDARGHQCS 553

  Fly   354 RCPY-----------------------------SFSRRDKLIAHQ-------------------- 369
            .|.:                             .|.|..:|..|.                    
Zfish   554 HCDHRSSNSSDLKRHIISVHTKDYPHKCAVCAKGFHRPSELKKHSASHKAKKMHQCRHCNFKISD 618

  Fly   370 ---------QVHTRRDMEQQQQMGLIPPMEGDLQQQA------------LQAKQKAAAQTKNS-- 411
                     .|||:...:..||....||..   .|||            :.|.|.||...|.:  
Zfish   619 PFVLSRHILSVHTKEPQQTAQQQQQTPPTS---PQQAPPTEKSPAPKRTIGAAQLAAPAVKKAGG 680

  Fly   412 -------RYYHCDVCDRTFQRERDLQRHQ-ALH-MDSLFACKTCNQGFNRREQLQRHELEAH 464
                   |.|.|..||.:.......:||. ::| .|....|:.|::||.|..:..:|.:..|
Zfish   681 AKGQRERRVYQCQYCDYSTGDASGFKRHVISIHTKDYPHRCQYCSKGFRRPSEKNQHIMRHH 742

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prgNP_609232.2 zf-AD 16..94 CDD:462262 15/89 (17%)
COG5048 <212..340 CDD:227381 44/175 (25%)
C2H2 Zn finger 239..260 CDD:275368 5/20 (25%)
C2H2 Zn finger 268..288 CDD:275368 10/19 (53%)
C2H2 Zn finger 296..316 CDD:275368 5/20 (25%)
C2H2 Zn finger 324..344 CDD:275368 5/19 (26%)
C2H2 Zn finger 352..372 CDD:275368 6/77 (8%)
C2H2 Zn finger 416..436 CDD:275368 5/20 (25%)
C2H2 Zn finger 443..464 CDD:275368 6/20 (30%)
C2H2 Zn finger 470..490 CDD:275368
LOC563292XP_691749.6 Zfx_Zfy_act 42..313 CDD:461400 44/301 (15%)
ROS_MUCR <330..>360 CDD:473244 3/29 (10%)
C2H2 Zn finger 330..350 CDD:275368 3/19 (16%)
C2H2 Zn finger 362..382 CDD:275368 3/19 (16%)
C2H2 Zn finger 392..412 CDD:275368 3/19 (16%)
C2H2 Zn finger 438..459 CDD:275368 5/20 (25%)
COG5048 463..>518 CDD:227381 21/54 (39%)
C2H2 Zn finger 467..487 CDD:275368 10/19 (53%)
zf-H2C2_2 479..503 CDD:463886 10/23 (43%)
C2H2 Zn finger 495..516 CDD:275368 5/20 (25%)
C2H2 Zn finger 524..544 CDD:275368 5/19 (26%)
C2H2 Zn finger 552..573 CDD:275368 2/20 (10%)
C2H2 Zn finger 581..601 CDD:275368 4/19 (21%)
C2H2 Zn finger 609..626 CDD:275368 0/16 (0%)
C2H2 Zn finger 692..713 CDD:275370 5/20 (25%)
C2H2 Zn finger 721..741 CDD:275370 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

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