DRSC/TRiP Functional Genomics Resources

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Protein Alignment prg and gl

DIOPT Version :10

Sequence 1:NP_609232.2 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster


Alignment Length:209 Identity:63/209 - (30%)
Similarity:91/209 - (43%) Gaps:52/209 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 EDEEDGQNGEDVDMPLGMDAAQMAAQQSVANNANTTEARPKRAFLCQYCDLGFTLPAECQEHELA 229
            |||||  :.||:|...|....:|                                          
  Fly   414 EDEED--SNEDLDGDEGSSGGEM------------------------------------------ 434

  Fly   230 AHDPNAPYCCNFCNIKLVTRPA-LISHIKTLHDPDRPYVCAHCRKGFVRRSDLKKHTIVHTGVRP 293
                 .|..|..|. |...||: |.:|::| |..:|||.|..|.|.|.:.::|..|...|||.:|
  Fly   435 -----KPNLCRLCG-KTYARPSTLKTHLRT-HSGERPYRCPDCNKSFSQAANLTAHVRTHTGQKP 492

  Fly   294 FTCNVCSKSFSRNTNLTKHMRIHSGVKPFVCQQCPRSFQTAVEMMRHTRSHGEVKAFQCGRCPYS 358
            |.|.:|.:.||:::::|.|||.|||.:|:.|..|.:||..:..:.:|.|.|...|.:||..|...
  Fly   493 FRCPICDRRFSQSSSVTTHMRTHSGERPYRCSSCKKSFSDSSTLTKHLRIHSGEKPYQCKLCLLR 557

  Fly   359 FSRRDKLIAHQQVH 372
            ||:...|..|.:||
  Fly   558 FSQSGNLNRHMRVH 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prgNP_609232.2 zf-AD 16..94 CDD:462262
COG5048 <212..340 CDD:227381 40/128 (31%)
C2H2 Zn finger 239..260 CDD:275368 8/21 (38%)
C2H2 Zn finger 268..288 CDD:275368 6/19 (32%)
C2H2 Zn finger 296..316 CDD:275368 8/19 (42%)
C2H2 Zn finger 324..344 CDD:275368 6/19 (32%)
C2H2 Zn finger 352..372 CDD:275368 6/19 (32%)
C2H2 Zn finger 416..436 CDD:275368
C2H2 Zn finger 443..464 CDD:275368
C2H2 Zn finger 470..490 CDD:275368
glNP_001262708.1 COG5048 <426..571 CDD:227381 53/193 (27%)
C2H2 Zn finger 439..459 CDD:275368 8/21 (38%)
C2H2 Zn finger 467..487 CDD:275368 6/19 (32%)
C2H2 Zn finger 495..515 CDD:275368 8/19 (42%)
C2H2 Zn finger 523..543 CDD:275368 6/19 (32%)
C2H2 Zn finger 551..571 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

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