DRSC/TRiP Functional Genomics Resources

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Protein Alignment prg and CG6689

DIOPT Version :10

Sequence 1:NP_609232.2 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_650051.1 Gene:CG6689 / 41345 FlyBaseID:FBgn0037877 Length:613 Species:Drosophila melanogaster


Alignment Length:525 Identity:103/525 - (19%)
Similarity:183/525 - (34%) Gaps:172/525 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 QDVSTCRLCHHN--TDPNSLNIFDDTVQFCKDVSI--AEVSKSLWSVQYDRNECLSELICSRCLE 72
            :::..||.|:::  .|..:.::||.    ...|.:  .||...:| :.:..:|  ..|:|..|..
  Fly   162 EELQKCRTCYNDFTADFRAKDLFDP----ANSVLLFHIEVISGVW-ISHKPDE--PRLMCPACKS 219

  Fly    73 ILEEAFELRKGMQEREQSLQEQLKEMIKDHPKHRPGL--------NGNPGVFVPEEGCIIVEVDP 129
            .|::|.:.      ||..:..:||     ..:.:|..        |.||   :..:..:|.:.:.
  Fly   220 ALDQAIDF------REMCISTELK-----LSQAKPSTDEVQIEAENENP---ISSDHDLISDTEN 270

  Fly   130 ENLAESSEEEFALGSDGEYENYDDDDEEEEEDYDEEDEEDGQNG------------EDVDMPLGM 182
            .|:.|..:    .|.|...:....||:..:|..||..|......            |.:|...|.
  Fly   271 TNVEEIED----AGGDHVEDEATSDDQTSQEAVDEVAESPAAQDPLSVALGAKIFKELLDQYTGK 331

  Fly   183 DAAQM-----AAQQSVANNANTTEARPKRA-----------------------FLCQYCDLGFTL 219
            :.|::     .|.:..|......|.:|||:                       |:|..|...|.:
  Fly   332 EKARLRKGAPIASKPKAKEKAAGEQKPKRSANPKTKEERNLIRRAQLRAKPPNFVCDQCGQAFRM 396

  Fly   220 PAECQEHELAAHDPNAPYCCNFCNIKLVTRPALISHIKTLHDPDRPYVCAHCRKGF----VRRSD 280
                 .|.|..|                    ::.|.:|     :.|.|..|.|.|    :|...
  Fly   397 -----SHNLRIH--------------------MLRHTRT-----KNYQCTECPKTFYDAYMRNMH 431

  Fly   281 LKKHTIVHTGVRPFTCNVCSKSFSRNTNLTKH-MRIHSGV--------------KP-----FVCQ 325
            ::   |.|.|..||.|..||::|:......|| ..:|:..              ||     :.|:
  Fly   432 IR---IRHRGETPFACGFCSETFAYPGARQKHESEVHNAAPRLIVKRINPKPMPKPRESVRYQCK 493

  Fly   326 QCPRSFQTAVEMMRHTRSHGEVKAFQCGRCPYSFSRRDKLIAHQQVHTRRDMEQQQQMGLIPPME 390
            .|.:.:.:...:..|.:||.:..|::|.||..|:|..:||..|:..|.:|.::            
  Fly   494 LCQKHYASKYALGWHIKSHTDANAYKCQRCSKSYSDPNKLKRHEMTHEKRPLQ------------ 546

  Fly   391 GDLQQQALQAKQKAAAQTKNSRYYHCDVCDRTFQRERDLQRHQALHM-DSLFACKTCNQGFNRRE 454
                                     ||||.:.|.:...|:.|:.:|. :..:.|:.||..|..:.
  Fly   547 -------------------------CDVCLKGFYQRTRLREHELIHTGERPYWCEVCNVNFRYKY 586

  Fly   455 QLQRH 459
            .::.|
  Fly   587 NMKSH 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prgNP_609232.2 zf-AD 16..94 CDD:462262 18/81 (22%)
COG5048 <212..340 CDD:227381 29/151 (19%)
C2H2 Zn finger 239..260 CDD:275368 2/20 (10%)
C2H2 Zn finger 268..288 CDD:275368 6/23 (26%)
C2H2 Zn finger 296..316 CDD:275368 6/20 (30%)
C2H2 Zn finger 324..344 CDD:275368 3/19 (16%)
C2H2 Zn finger 352..372 CDD:275368 8/19 (42%)
C2H2 Zn finger 416..436 CDD:275368 7/19 (37%)
C2H2 Zn finger 443..464 CDD:275368 5/17 (29%)
C2H2 Zn finger 470..490 CDD:275368
CG6689NP_650051.1 THAP 2..94 CDD:214951
zf-AD 166..241 CDD:462262 20/92 (22%)
zf-C2H2 385..407 CDD:395048 7/46 (15%)
C2H2 Zn finger 387..407 CDD:275368 6/44 (14%)
C2H2 Zn finger 415..436 CDD:275368 6/23 (26%)
C2H2 Zn finger 444..460 CDD:275368 4/15 (27%)
C2H2 Zn finger 492..512 CDD:275368 3/19 (16%)
C2H2 Zn finger 520..540 CDD:275368 8/19 (42%)
C2H2 Zn finger 547..567 CDD:275368 7/19 (37%)
zf-met 573..597 CDD:463736 5/19 (26%)
C2H2 Zn finger 575..591 CDD:275368 4/15 (27%)
Blue background indicates that the domain is not in the aligned region.

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