DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment prg and M1BP

DIOPT Version :9

Sequence 1:NP_001260253.1 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_649825.1 Gene:M1BP / 41042 FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster


Alignment Length:439 Identity:107/439 - (24%)
Similarity:176/439 - (40%) Gaps:70/439 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 STCRLC-HHNTDPNSLNIFDDTVQFCKDVSIAEVSKSLWSVQYDRNECLSELICSRCLEILEEAF 78
            ||||:| .:.::..|..:|:.:     :..:.:..::|..::.:...||.:.||..|      :.
  Fly    11 STCRVCAKYASNKRSPKLFERS-----NTKMIDNIEALTGLRLENYGCLPDQICECC------SM 64

  Fly    79 ELRKGMQEREQSLQEQLKEMIKDHPKHRPGLNGNPGVFVPEEGCIIVEVDPEN-----------L 132
            ||...::.||:.:..|.:.::....:.|.|::......|..|..:.....|::           |
  Fly    65 ELASAVKLRERCIAAQRELLLGLTEEQRQGISAFYRAAVMGEDIVQTVKTPDDDEVYATYQEIVL 129

  Fly   133 AESSEE-------------EFALGSDGEYENYDDDDEE--EEEDYDE---EDEEDGQN---GEDV 176
            .|..||             |.|.|..||     ||...  ||.|||.   ||||..|.   .||.
  Fly   130 EEPKEEIDDTKVEYDNTYYEVAEGHAGE-----DDAASLIEEADYDSIMAEDEEQQQTLELDEDT 189

  Fly   177 DMPLG--MDAAQMAAQQSVANNANTTEARPKRA-FLCQYCDLGFTLP--AECQEHELAAHDPNAP 236
            ::.:|  .||....:...||...|..:...:.. .:.:.|    :||  .:.:..:.........
  Fly   190 ELIVGDVNDAYVYDSDDEVAVLDNVLDDEYEHENIVVKKC----SLPPKPKVRSDDARRRGTGGV 250

  Fly   237 YCCNFCNIKLVTRPALISHIKTLHDPDRPYVCAHCRKGFVRRSDLKKHTIVHTGVRPFTCNVCSK 301
            |.|..|...:..|.|...|.:. |..|:.:.|..|:..|...|:||:|...|||.|||.|..|.:
  Fly   251 YICEQCGNHIKGRMAFELHCRR-HRGDKQFGCELCQSRFCTTSELKRHMRKHTGERPFACKYCGR 314

  Fly   302 SFSRNTNLTKHMRIHSGVKPFVCQQCPRSFQTAVEMMRHTRSHGEVKAFQCGRCPYSFSRRDKLI 366
            .|:..|...||.|.|:..:|:||..|.::|.|...:..|...|...:|::|..|..||    .|.
  Fly   315 CFTDYTTRVKHERTHTNERPYVCGTCGKAFTTGYILKNHMLIHSGERAYRCELCDKSF----MLP 375

  Fly   367 AHQQVHTRRDMEQQQQMGLIPPMEGDLQQQALQAKQKAAAQTKNSRYYH 415
            .|...|.|..:.::.       :|....:|.|:.:||...:.:.....|
  Fly   376 THLSTHFRSGVHKRH-------LEKAEMKQVLEQEQKRELKEEEEDSLH 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prgNP_001260253.1 zf-AD 16..94 CDD:285071 16/78 (21%)
COG5048 <212..340 CDD:227381 38/129 (29%)
C2H2 Zn finger 239..260 CDD:275368 5/20 (25%)
C2H2 Zn finger 268..288 CDD:275368 7/19 (37%)
zf-H2C2_2 280..305 CDD:290200 12/24 (50%)
zf-C2H2 294..316 CDD:278523 8/21 (38%)
C2H2 Zn finger 296..316 CDD:275368 7/19 (37%)
zf-H2C2_2 308..331 CDD:290200 8/22 (36%)
C2H2 Zn finger 324..344 CDD:275368 5/19 (26%)
C2H2 Zn finger 352..372 CDD:275368 6/19 (32%)
C2H2 Zn finger 416..436 CDD:275368 107/439 (24%)
C2H2 Zn finger 443..464 CDD:275368
C2H2 Zn finger 470..490 CDD:275368
M1BPNP_649825.1 zf-AD 13..84 CDD:214871 16/81 (20%)
C2H2 Zn finger 253..273 CDD:275368 5/20 (25%)
COG5048 276..>331 CDD:227381 22/54 (41%)
C2H2 Zn finger 281..301 CDD:275368 7/19 (37%)
zf-H2C2_2 293..317 CDD:290200 11/23 (48%)
C2H2 Zn finger 309..329 CDD:275368 7/19 (37%)
zf-H2C2_2 324..346 CDD:290200 9/21 (43%)
C2H2 Zn finger 337..357 CDD:275368 5/19 (26%)
zf-H2C2_2 350..372 CDD:290200 5/21 (24%)
C2H2 Zn finger 365..383 CDD:275368 7/21 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24388
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.