DRSC/TRiP Functional Genomics Resources

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Protein Alignment prg and ouib

DIOPT Version :10

Sequence 1:NP_609232.2 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_649822.2 Gene:ouib / 41039 FlyBaseID:FBgn0037618 Length:312 Species:Drosophila melanogaster


Alignment Length:366 Identity:86/366 - (23%)
Similarity:140/366 - (38%) Gaps:68/366 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 CRLC-HHNTDPNSLNIFDDTVQFCKDVSIAEVSKSLWSVQYDRNECLSELICSRCLEILEEAFEL 80
            ||:| .......|||:||...:  |.:....:...|..|..|.   :...:|..|      ..||
  Fly     6 CRVCGRQKICEKSLNLFDLVNR--KYLKHLHMISGLRLVDLDD---VPGFMCLCC------QAEL 59

  Fly    81 RKGMQEREQSLQEQLKEM-IKDHPKHRPGLNGNPGVFVPEEGCIIVEVDPENLAESSEEEFALGS 144
            |..:..|:..::.|.|.: |:|        :.:.|           :.|..:.:|...|:.|...
  Fly    60 RSALAFRKLCIKTQTKWLTIED--------DSSSG-----------DEDTNDNSELESEKCAFSD 105

  Fly   145 DGEYENYDDDDEEEEEDYDEEDEEDGQNGEDVDMPLGMDAAQMAAQQSVANNANTTEARPKRAFL 209
            .|:.:    :.|..||.:....||     |.:|..|..||.....:..:     ..:..|.:..:
  Fly   106 FGKKK----EGELVEETFQVLIEE-----EPMDKTLNRDAKAQLREDGI-----DEKCVPSQKII 156

  Fly   210 CQYCDLGFTLPAECQEHELAAHDPNAPYCCNFCNIKLVTRPALISHIKTLHDPDRPYVCAHCRKG 274
                             :::....:..|.|..|.....::|....|::. |..:||:.|..|...
  Fly   157 -----------------KVSTKLDDQIYICELCGTHATSKPTFQRHMRK-HRGERPFGCKDCDAR 203

  Fly   275 FVRRSDLKKHTIVHTGVRPFTCNVCSKSFSRNTNLTKHMRIHSGVKPFVCQQCPRSFQTAVEMMR 339
            |:...:|:.|..||||.:||.|..|.|.:........|.|.|:..:|:||::|.:.|.||..:..
  Fly   204 FLSAGELRAHHRVHTGEQPFACRFCEKRYVSYMGRLIHERTHTNDRPYVCEECGKKFTTAYVLKN 268

  Fly   340 HTRSHGEVKAFQCGRCPYSFSRRDKLIAHQQVHTRRDMEQQ 380
            |...|...:.|:|..|..||.|:    ||...|||..|..|
  Fly   269 HMVIHTGERNFRCDICDRSFQRK----AHLVTHTRSMMHLQ 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prgNP_609232.2 zf-AD 16..94 CDD:462262 18/77 (23%)
COG5048 <212..340 CDD:227381 32/127 (25%)
C2H2 Zn finger 239..260 CDD:275368 4/20 (20%)
C2H2 Zn finger 268..288 CDD:275368 5/19 (26%)
C2H2 Zn finger 296..316 CDD:275368 5/19 (26%)
C2H2 Zn finger 324..344 CDD:275368 6/19 (32%)
C2H2 Zn finger 352..372 CDD:275368 7/19 (37%)
C2H2 Zn finger 416..436 CDD:275368
C2H2 Zn finger 443..464 CDD:275368
C2H2 Zn finger 470..490 CDD:275368
ouibNP_649822.2 zf-AD 5..78 CDD:214871 20/82 (24%)
C2H2 Zn finger 169..189 CDD:275368 4/20 (20%)
zf-H2C2_2 182..206 CDD:463886 7/24 (29%)
C2H2 Zn finger 197..217 CDD:275368 5/19 (26%)
SFP1 <219..269 CDD:227516 16/49 (33%)
C2H2 Zn finger 225..245 CDD:275368 5/19 (26%)
C2H2 Zn finger 253..273 CDD:275368 6/19 (32%)
zf-H2C2_2 266..288 CDD:463886 5/21 (24%)
C2H2 Zn finger 281..299 CDD:275368 8/21 (38%)
Blue background indicates that the domain is not in the aligned region.

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