DRSC/TRiP Functional Genomics Resources

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Protein Alignment prg and CG7368

DIOPT Version :10

Sequence 1:NP_609232.2 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001036599.1 Gene:CG7368 / 39301 FlyBaseID:FBgn0036179 Length:530 Species:Drosophila melanogaster


Alignment Length:298 Identity:69/298 - (23%)
Similarity:106/298 - (35%) Gaps:84/298 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 QNGEDVDM-PLGMDAAQMAAQQSVANNANTTEA---------------RPKRA------------ 207
            |..|.:.: |......|:..|.:|...|.|..|               |.||:            
  Fly   252 QQAEQLTLQPQQQATLQVQTQAAVTATATTATATTAGGSGATSGKKKKRKKRSKDRKTKLRPGEI 316

  Fly   208 -----------FLCQYCDLGFTLPAECQEHELAAHDPNAPYCCNFCNIKLVTRPALISHIKTLHD 261
                       ::|..|.:.:..| |..|..|..|:....|.|:.|...|..:..|..| |..|:
  Fly   317 RLGTALDGSPLYMCPECHVAYPEP-ELLEVHLVGHNLEKRYVCDICQASLKRKDHLTRH-KQSHN 379

  Fly   262 PDRPYVCAHCRKGFVRRSDLKKHTIVHTGVRPFTCNVCSKSFSRNTNLTKHMRIH---------- 316
            |:|||:|..|.|.|.|:..|..|.::|:|.:...|..|.|.|.|..:|.||.|.|          
  Fly   380 PERPYICTVCLKAFKRKEQLSLHFVIHSGEKRHQCGECGKGFYRKDHLRKHTRSHIARRVKAELN 444

  Fly   317 ---------SGVKPFVCQQCPRSFQTAVEMMRHTRSHGEVKAFQCGRCPYSFSRRDKLIAHQQVH 372
                     |.::|.|.:....:.|.|.::.                     |.:.:|...||..
  Fly   445 SHVRRENGTSMLQPVVTEATTAALQHANQLA---------------------SAQQQLQQQQQQQ 488

  Fly   373 TRRDMEQQQQMG---LIPPMEGDLQQQALQAKQKAAAQ 407
            .::..:||||..   :|...:...|||...::|:...|
  Fly   489 QQQQQQQQQQQQHHIVITQQQATPQQQQQTSQQQQQQQ 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prgNP_609232.2 zf-AD 16..94 CDD:462262
COG5048 <212..340 CDD:227381 42/146 (29%)
C2H2 Zn finger 239..260 CDD:275368 6/20 (30%)
C2H2 Zn finger 268..288 CDD:275368 7/19 (37%)
C2H2 Zn finger 296..316 CDD:275368 9/19 (47%)
C2H2 Zn finger 324..344 CDD:275368 2/19 (11%)
C2H2 Zn finger 352..372 CDD:275368 4/19 (21%)
C2H2 Zn finger 416..436 CDD:275368
C2H2 Zn finger 443..464 CDD:275368
C2H2 Zn finger 470..490 CDD:275368
CG7368NP_001036599.1 C2H2 Zn finger 330..350 CDD:275368 6/20 (30%)
COG5048 356..>412 CDD:227381 21/56 (38%)
C2H2 Zn finger 358..378 CDD:275368 6/20 (30%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
zf-C2H2 412..434 CDD:395048 9/21 (43%)
C2H2 Zn finger 414..434 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.

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