DRSC/TRiP Functional Genomics Resources

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Protein Alignment prg and CG10274

DIOPT Version :9

Sequence 1:NP_001260253.1 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001097525.1 Gene:CG10274 / 38716 FlyBaseID:FBgn0035690 Length:863 Species:Drosophila melanogaster


Alignment Length:641 Identity:138/641 - (21%)
Similarity:220/641 - (34%) Gaps:192/641 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 STCRLCHHNTDPN-----SLNIFDDTVQFCKDVSIAEVSKSL---WSVQYDRNECLSELICSRCL 71
            :.||:|.:....|     |.::|          .|..::|.|   .|:..::::...:.:|::|.
  Fly    14 AVCRICLNRLPENGGGAGSFDLF----------LIPGLAKKLCVCTSLAVEQSDGFPKCLCAQCF 68

  Fly    72 EILEEAFELRKGMQEREQSLQEQLKEMIKDHP-----KHRPGLN--GNPGVFVPEEGCIIVEVDP 129
            ..|::..|.:|...:..|..|:.:...:...|     |:...||  ||....|.::....:..||
  Fly    69 SRLDDMHEFQKLCVDSVQKFQDMVARNVFCPPASAQMKNFDLLNVAGNEPELVGQDEEDRINFDP 133

  Fly   130 -----ENLAESSEEEFAL--GSDGEYENYD-------------------DDDEEEEEDYDEE-DE 167
                 ..:.|:.|:.|.:  ..|.|.|..:                   :..||.|||.|:: |.
  Fly   134 LLDHKMEMIENEEDVFKMLEHVDKEAEQVEKEVKQDELDAADLMTIFAAESSEESEEDIDQDVDF 198

  Fly   168 EDGQNGEDVDMPLGM---DAAQMAAQQSVA-----------------NNANTTEARPK------- 205
            |...:..|.|:||..   |.::|..:...|                 .:...:::|.|       
  Fly   199 EPNSSDGDDDVPLAQRLRDNSRMIPKAKAAVIKEEDQEFPTGSEEEDEDGEKSKSRRKRIPPGER 263

  Fly   206 ---RAFLCQYCDLGFTLPAECQEHELAAHDPNAPYCC---------------------------- 239
               |...|..|...|......:|| :..|:...|:.|                            
  Fly   264 HLHRIIDCHICHQKFKKAIRYEEH-MKHHNDLLPFQCKVETCRKGFTTAGGLRLHIDHAHTELSE 327

  Fly   240 -NFCNI----KLVTRPALIS-HIKTLHD------PDRPYVCAHCRKGFVRRSDLKKHTIVHTGVR 292
             :.||:    |...|..|:: |:|.:|.      |.|.|.|..|.|.|.....||||...|.|..
  Fly   328 VHSCNVDGCGKTFPRIRLLTFHMKKMHGITKAAAPPRDYPCTECEKVFRCPMALKKHMYKHDGKE 392

  Fly   293 -PFTCNVCSKSFSRNTNLTKHMRIHSGVKPFVCQQCPRSFQTAVEMMRHTRSHGEVKAFQCGRCP 356
             ||.||:|.|.|..|:.|..|:..|:|:|.:||..|.....|..|...|..:|.:.|.|:|..|.
  Fly   393 LPFPCNICGKRFVINSALKDHLMRHAGIKNYVCPYCGVGKTTRQEWNTHILTHTQEKKFKCHICE 457

  Fly   357 YSFSRRDKLIAH-QQVHTRRDMEQQQQMGLIPPMEGDLQQQALQAKQKAAAQTKNSRYYHCDVCD 420
            ::...:..|..| :.||.:                                 .||   |.|..|.
  Fly   458 HASHNKQSLANHIKIVHEK---------------------------------IKN---YACQYCG 486

  Fly   421 RTFQRERDLQRHQALHMDSLFACKTCNQGFNRREQLQRHELEAHGPSFTCGICCISFLHQIELEN 485
            :||.:....:.|:..|...    |.|.                      |.:|...||:...|..
  Fly   487 KTFGKSHACKIHEMTHTGE----KRCE----------------------CKVCGKKFLYPKSLTK 525

  Fly   486 HLKVHQLQHKMA-----QRAQEAAILPLKMAEKAPVAMTAPLVQDPQLVRPSAAEL 536
            |||.|:.:...|     ||..|....|.:..:..|......:..:|.:.|.:|.||
  Fly   526 HLKTHEKRVLRAIETYRQRQVEMGETPGEQFDNPPAPPVEGISIEPIMSRNAADEL 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prgNP_001260253.1 zf-AD 16..94 CDD:285071 17/85 (20%)
COG5048 <212..340 CDD:227381 46/168 (27%)
C2H2 Zn finger 239..260 CDD:275368 8/54 (15%)
C2H2 Zn finger 268..288 CDD:275368 8/19 (42%)
zf-H2C2_2 280..305 CDD:290200 13/25 (52%)
zf-C2H2 294..316 CDD:278523 9/21 (43%)
C2H2 Zn finger 296..316 CDD:275368 8/19 (42%)
zf-H2C2_2 308..331 CDD:290200 8/22 (36%)
C2H2 Zn finger 324..344 CDD:275368 5/19 (26%)
C2H2 Zn finger 352..372 CDD:275368 4/20 (20%)
C2H2 Zn finger 416..436 CDD:275368 5/19 (26%)
C2H2 Zn finger 443..464 CDD:275368 2/20 (10%)
C2H2 Zn finger 470..490 CDD:275368 8/19 (42%)
CG10274NP_001097525.1 zf-AD 15..90 CDD:214871 16/84 (19%)
C2H2 Zn finger 334..353 CDD:275368 5/18 (28%)
C2H2 Zn finger 368..388 CDD:275368 8/19 (42%)
COG5048 394..729 CDD:227381 59/250 (24%)
C2H2 Zn finger 397..417 CDD:275368 8/19 (42%)
C2H2 Zn finger 425..445 CDD:275368 5/19 (26%)
C2H2 Zn finger 453..474 CDD:275368 4/20 (20%)
C2H2 Zn finger 482..502 CDD:275368 5/19 (26%)
C2H2 Zn finger 510..530 CDD:275368 8/19 (42%)
C2H2 Zn finger 638..659 CDD:275368
C2H2 Zn finger 667..687 CDD:275368
zf-H2C2_2 680..704 CDD:290200
C2H2 Zn finger 695..715 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24388
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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