DRSC/TRiP Functional Genomics Resources

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Protein Alignment prg and Kah

DIOPT Version :10

Sequence 1:NP_609232.2 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_612040.1 Gene:Kah / 38072 FlyBaseID:FBgn0035144 Length:442 Species:Drosophila melanogaster


Alignment Length:217 Identity:42/217 - (19%)
Similarity:69/217 - (31%) Gaps:58/217 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PLISSPVPGLTIIASYLYFVLNFGPKYMANRKPFQMQKTLVVYNFIQVLVSIYLFAEGLDGAWLR 93
            ||.||..|.:....|  .|.:....||..:|          :.:::..|::..|..:...|:   
  Fly    12 PLKSSKTPLMARAIS--LFRMAVRTKYCTSR----------IKSYVIPLLNYSLDTQSSQGS--- 61

  Fly    94 HYSWRCQPVDFNDNPAAMRVARG---------CYIYFLAKISELLDTVFFTLRKKDNQITF-LHL 148
                  .||.|.:....:...:|         |    |.|:.|..:.|  .|.|.:....| .|.
  Fly    62 ------VPVSFFELLGLLGSLKGITSDEVVSPC----LLKLCEAGEVV--KLDKGEQLSQFAAHF 114

  Fly   149 YHHTVMPMISWGATKYYPGGHGT---------FIGVI-------NSFVHIVMYTYYMMAAMG--- 194
            ...|..|. :.....::|...||         |:|..       |.....|..:|..::.|.   
  Fly   115 ISDTDQPQ-TCNFANFFPLSEGTPLQRAEWIKFLGAFTNLETKANQVYDSVKASYTCLSQMAANK 178

  Fly   195 -PQYQKYLWWKKYITNLQMIQF 215
             ..::..:.|..|..|..|..|
  Fly   179 TKSFKPIVAWMGYDQNGGMWSF 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prgNP_609232.2 zf-AD 16..94 CDD:462262 13/64 (20%)
COG5048 <212..340 CDD:227381 2/4 (50%)
C2H2 Zn finger 239..260 CDD:275368
C2H2 Zn finger 268..288 CDD:275368
C2H2 Zn finger 296..316 CDD:275368
C2H2 Zn finger 324..344 CDD:275368
C2H2 Zn finger 352..372 CDD:275368
C2H2 Zn finger 416..436 CDD:275368
C2H2 Zn finger 443..464 CDD:275368
C2H2 Zn finger 470..490 CDD:275368
KahNP_612040.1 C2H2 Zn finger 121..141 CDD:275368 4/20 (20%)
zf-C2H2 176..198 CDD:395048 3/21 (14%)
C2H2 Zn finger 178..198 CDD:275368 3/19 (16%)
zf-H2C2_2 191..214 CDD:463886 4/10 (40%)
zf-C2H2 204..226 CDD:395048
C2H2 Zn finger 206..226 CDD:275368
C2H2 Zn finger 234..250 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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