DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment prg and cg

DIOPT Version :10

Sequence 1:NP_609232.2 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster


Alignment Length:462 Identity:105/462 - (22%)
Similarity:169/462 - (36%) Gaps:109/462 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 EDEEDGQNGEDVDMPLGMDAAQMAAQQSVANNANTTEA----RPKRAFLCQYCDLGFTLPAECQE 225
            ||.||.| ||..::.|.....:::.:..:..:.:.:|.    :.:|.:.|..|...|.|......
  Fly   246 EDNEDSQ-GEAPNLKLEPGTLELSPKTELQESMHFSETDATIKKERPYSCDECGKSFLLKHHLTT 309

  Fly   226 HELAAHDPNAPYCCNFCNIKLVTRPALISHIKTLHDPDRPYVCAHCRKGFVRRSDLKKHTIVHTG 290
            | ...|....|:.|..|......:..|.:|: .||..:|||.|..|:|.|..:..|..|:.||:.
  Fly   310 H-ARVHTGERPHICTHCGKSFAHKHCLNTHL-LLHSTERPYQCQECKKSFTLKHHLLTHSRVHSR 372

  Fly   291 VRPFTCNVCSKSFSRNTNLTKHMRIHSGVKPFVCQQCPRSFQTAVEMMRHTRSHGEVKAFQCGRC 355
            .|||.|..|.::|....:|..|.:.|:|.:|:||::|..||.....::.|:|.||.:..|.|..|
  Fly   373 ERPFVCQECGRAFPLKRHLVTHSKFHAGERPYVCEECGESFAQENHLIMHSRFHGSLNPFVCAEC 437

  Fly   356 PYSFSRRDKLIAHQQVHTRRDMEQQQQMGLIPPMEGDLQQQALQAKQKAAAQTKNSRYYHCDVCD 420
            ..||.|:.:|:.|.::|           |.||                          :.|.||.
  Fly   438 GASFPRKFQLVNHGRIH-----------GKIP--------------------------HSCTVCG 465

  Fly   421 RTFQRERDLQRH-QALHM-DSLFACKTCNQGFNRREQLQRHELEAHG------------------ 465
            :.|.::|.|..| :.:|. :....|.:|.:||..:.:|.:|...||.                  
  Fly   466 KEFLQKRTLVSHMRRVHTGEQAHPCVSCGEGFLTKAELHQHVRTAHNGVNPNTSSATIIANQQLQ 530

  Fly   466 ----------------------------------------PSFTCGICCISFLHQIELENHLKVH 490
                                                    |.|.|..|..:|..:..|..||::|
  Fly   531 QAHHHQAGQQTHPQTITVVSNPGNSTLLTVSTTDANGVARPQFVCRECGSAFNSREALALHLRLH 595

  Fly   491 QLQHK-MAQRAQEAAILPLKMAEKAPVAMTAPLVQDPQLVRPSAAELSFYSN----MIPTMNLGF 550
            ..... |.......|.||......|.:.....:..:|.||..|...:...|:    |..|..:..
  Fly   596 TGDKSLMTDLCALTAALPGHFLSTASLNPGTVVTANPNLVGQSPVPVQIISSTGQVMSQTTLVQA 660

  Fly   551 YSETRPE 557
            .:.|.|:
  Fly   661 ANSTHPQ 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prgNP_609232.2 zf-AD 16..94 CDD:462262
COG5048 <212..340 CDD:227381 39/127 (31%)
C2H2 Zn finger 239..260 CDD:275368 4/20 (20%)
C2H2 Zn finger 268..288 CDD:275368 6/19 (32%)
C2H2 Zn finger 296..316 CDD:275368 5/19 (26%)
C2H2 Zn finger 324..344 CDD:275368 6/19 (32%)
C2H2 Zn finger 352..372 CDD:275368 7/19 (37%)
C2H2 Zn finger 416..436 CDD:275368 7/20 (35%)
C2H2 Zn finger 443..464 CDD:275368 6/20 (30%)
C2H2 Zn finger 470..490 CDD:275368 6/19 (32%)
cgNP_001097306.2 COG5048 287..>371 CDD:227381 24/85 (28%)
C2H2 Zn finger 294..314 CDD:275368 5/20 (25%)
zf-H2C2_2 306..331 CDD:463886 5/25 (20%)
C2H2 Zn finger 322..342 CDD:275368 4/20 (20%)
C2H2 Zn finger 350..370 CDD:275368 6/19 (32%)
C2H2 Zn finger 378..398 CDD:275368 5/19 (26%)
C2H2 Zn finger 406..426 CDD:275368 6/19 (32%)
C2H2 Zn finger 434..454 CDD:275368 7/19 (37%)
C2H2 Zn finger 461..482 CDD:275368 7/20 (35%)
C2H2 Zn finger 490..509 CDD:275368 6/18 (33%)
C2H2 Zn finger 575..595 CDD:275368 6/19 (32%)
C2H2 Zn finger 720..740 CDD:275368
C2H2 Zn finger 752..771 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.