DRSC/TRiP Functional Genomics Resources

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Protein Alignment prg and Zfat

DIOPT Version :10

Sequence 1:NP_609232.2 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster
Sequence 2:XP_006241775.1 Gene:Zfat / 362925 RGDID:1310886 Length:1235 Species:Rattus norvegicus


Alignment Length:461 Identity:118/461 - (25%)
Similarity:177/461 - (38%) Gaps:110/461 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 KGMQER---EQSLQEQLKEMIKDHPKHRPGLNGNPGVFVPEEGCIIVEVDPENLAESSEE----- 138
            ||..::   |:.:.|.|...|:|.|            ..||||        ..||.||.|     
  Rat    78 KGSTKKPSTEEEVVENLVSPIEDGP------------LAPEEG--------SRLAPSSLECSKCC 122

  Fly   139 -EFA---------------LGSDGEYENYDDDDEEEEEDYDEEDEED------GQNGEDVDMPLG 181
             :|:               ||.:|:..|  :.|.:.|:.|.|:|.|.      .|..|.|....|
  Rat   123 RKFSNTRQLRKHICIIVLNLGEEGDAGN--ESDLDLEKTYKEDDREKTSKRPRAQKTEKVQKISG 185

  Fly   182 MDAAQMAAQQ----SVANNANTTEARPKRAFLCQYCDLGFT--LPAECQEHELAAHDPNAPYCCN 240
            .:|.|::..:    ||...|:  ||.|           |.|  :|.|....|..|..|.....  
  Rat   186 KEAGQLSGAKKPIISVVLTAH--EAIP-----------GATKIIPVEAGPPETGAPPPETTAA-- 235

  Fly   241 FCNIKLVTRPALISHIKTLHDPDRP-------------YVCAHCRKGFVRRSDLKKHTIVHTGVR 292
                .||.|.....:.......::|             :.|.:|.|.|..:..|:.|..:||..:
  Rat   236 ----DLVPRRGYQEYAIQQTPYEQPMKSSRLGPTQLKIFTCEYCNKVFKFKHSLQAHLRIHTNEK 296

  Fly   293 PFTCNVCSKSFSRNTNLTKHMRIHSGVKPFVCQQCPRSFQTAVEMMRH-TRSHGEVKAFQCGRCP 356
            |:.|:.||.:.:...||..|:|.|:|.| |.|..|..:..:...:..| .|.|.::|. .|..|.
  Rat   297 PYKCSQCSYASAIKANLNVHLRKHTGEK-FACDYCSFTCLSKGHLKVHIERVHKKIKQ-HCRFCK 359

  Fly   357 YSFSRRDKLIAHQQVHTRRDMEQQQQMGLIPPMEGDLQQQALQAKQKAAAQTKNSRYYHCDVCDR 421
            ..:|....||.|     .|||...|...:         ::||...:....:.|....|.|.:|:|
  Rat   360 KKYSDVKNLIKH-----IRDMHDPQDKKV---------KEALDELRLMTREGKRQLLYDCHICER 410

  Fly   422 TFQRERDLQRHQALHMDSL-FACKTCNQGFNRREQLQRHELEAHGPSFTCGICCISFLHQIELEN 485
            .|:.|.|..||..:|.|.. |||:.|..|..:.:.|:.| :..|...:.|.||...|:..|.|.:
  Rat   411 KFKNELDRDRHMLVHGDKWPFACELCGHGATKYQALELH-VRKHPFVYVCAICLKKFVSSIRLRS 474

  Fly   486 HLK-VH 490
            |:: ||
  Rat   475 HIREVH 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prgNP_609232.2 zf-AD 16..94 CDD:462262 3/14 (21%)
COG5048 <212..340 CDD:227381 33/142 (23%)
C2H2 Zn finger 239..260 CDD:275368 3/20 (15%)
C2H2 Zn finger 268..288 CDD:275368 6/19 (32%)
C2H2 Zn finger 296..316 CDD:275368 7/19 (37%)
C2H2 Zn finger 324..344 CDD:275368 4/20 (20%)
C2H2 Zn finger 352..372 CDD:275368 6/19 (32%)
C2H2 Zn finger 416..436 CDD:275368 8/19 (42%)
C2H2 Zn finger 443..464 CDD:275368 5/20 (25%)
C2H2 Zn finger 470..490 CDD:275368 7/20 (35%)
ZfatXP_006241775.1 zf-C2H2 270..292 CDD:395048 6/21 (29%)
C2H2 Zn finger 272..292 CDD:275368 6/19 (32%)
zf-H2C2_2 284..308 CDD:463886 8/23 (35%)
zf-H2C2_5 298..322 CDD:404746 8/23 (35%)
C2H2 Zn finger 300..320 CDD:275368 7/19 (37%)
C2H2 Zn finger 327..348 CDD:275368 4/20 (20%)
C2H2 Zn finger 355..395 CDD:275368 12/53 (23%)
C2H2 Zn finger 405..425 CDD:275368 8/19 (42%)
C2H2 Zn finger 433..453 CDD:275368 5/20 (25%)
C2H2 Zn finger 459..477 CDD:275368 7/17 (41%)
C2H2 Zn finger 737..757 CDD:275368
C2H2 Zn finger 765..815 CDD:275368
C2H2 Zn finger 825..844 CDD:275368
C2H2 Zn finger 875..896 CDD:275368
C2H2 Zn finger 904..924 CDD:275368
C2H2 Zn finger 932..952 CDD:275368
zf-H2C2_5 959..981 CDD:404746
C2H2 Zn finger 961..981 CDD:275368
C2H2 Zn finger 989..1010 CDD:275368
C2H2 Zn finger 1036..1054 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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