DRSC/TRiP Functional Genomics Resources

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Protein Alignment prg and CG17328

DIOPT Version :10

Sequence 1:NP_609232.2 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_609786.2 Gene:CG17328 / 34962 FlyBaseID:FBgn0028895 Length:413 Species:Drosophila melanogaster


Alignment Length:430 Identity:91/430 - (21%)
Similarity:157/430 - (36%) Gaps:110/430 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 CRLCHHNTDPNSLNIFDDTVQFCKDVSIAEVSKSLWSVQYDRNECLSELICSRCLEILEEAFELR 81
            ||:|.....|.: :|:.........|.:.:.:|    ::..:.:.|..:||:.|:..|..||..:
  Fly     9 CRVCLEELHPVT-SIYSTDFAMMPSVMLMQCAK----IRVFKTDGLPSVICNNCIYRLGVAFHFK 68

  Fly    82 KGMQEREQSLQEQLKEMIKDHPKHRPGLNGNPGVFVPEEGCIIVEVDPENLAESSEEEFALGSDG 146
            :..:..:..|::.|                                   .:.||..::.|..:| 
  Fly    69 QECENSDLRLRQYL-----------------------------------GILESWRQDAATNTD- 97

  Fly   147 EYENYDDDDEEEEEDYDEEDEEDGQNGEDVDMPLGMDAAQMAAQQSVANNANTTEARPKRAFLCQ 211
                :.:.....:.|.|||:..|.:                     |:...:..:.:|.      
  Fly    98 ----FVEKPLLPQRDSDEEEPVDAK---------------------VSKRRSRYQRKPP------ 131

  Fly   212 YCDLGFTLPAECQEHELAAHD--PNAPYCCNFCNIKLVTRPALISHIKTLHDPDRPYVCAHCRKG 274
                        :||:.....  |..|:.|..|:........|..||:| |..::||.|:.|.:.
  Fly   132 ------------EEHKKRGPKPVPKMPHTCYECHKSFKCIAQLTQHIRT-HTGEKPYQCSFCIQR 183

  Fly   275 FVRRSDLKKHTIVHTGVRPFTCNVCSKSFSRNTNLTKHMRIHSGVKPFVCQQCPRSFQTAVEMMR 339
            |.::.:||.|...|||.:||.|.:|||.||...|...|.:||.||:..||..|.:.|.||.::.:
  Fly   184 FAQKYNLKVHERTHTGDKPFQCEICSKQFSALGNFQAHQKIHLGVRDQVCSLCQKGFYTAGDLSK 248

  Fly   340 HTRSHGEVKAFQCGRCPYSFSRRDKLIAHQ-QVHTRRDMEQQQQMGLIPPMEGDLQQQALQAKQK 403
            |..:|..:|...|..|..:||||..:..|: ::|               |:|.......:.....
  Fly   249 HMITHTGIKNHHCDVCGKAFSRRRDMRTHKLKLH---------------PLESSTNHDIVDDDDD 298

  Fly   404 AAAQTK-------NSRYYHCDVCDRTFQRERDLQRHQALH 436
            .|..|.       :..::.|..||:.|.....|..|...|
  Fly   299 EAIDTDPVGLDTLDHAHFKCPDCDKAFDTADSLSLHFRTH 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prgNP_609232.2 zf-AD 16..94 CDD:462262 15/76 (20%)
COG5048 <212..340 CDD:227381 42/129 (33%)
C2H2 Zn finger 239..260 CDD:275368 6/20 (30%)
C2H2 Zn finger 268..288 CDD:275368 6/19 (32%)
C2H2 Zn finger 296..316 CDD:275368 8/19 (42%)
C2H2 Zn finger 324..344 CDD:275368 6/19 (32%)
C2H2 Zn finger 352..372 CDD:275368 7/20 (35%)
C2H2 Zn finger 416..436 CDD:275368 6/19 (32%)
C2H2 Zn finger 443..464 CDD:275368
C2H2 Zn finger 470..490 CDD:275368
CG17328NP_609786.2 zf-AD 8..80 CDD:214871 15/75 (20%)
COG5048 146..>211 CDD:227381 24/65 (37%)
C2H2 Zn finger 149..169 CDD:275368 6/20 (30%)
C2H2 Zn finger 177..197 CDD:275368 6/19 (32%)
zf-H2C2_2 189..213 CDD:463886 12/23 (52%)
C2H2 Zn finger 205..225 CDD:275368 8/19 (42%)
C2H2 Zn finger 233..253 CDD:275368 6/19 (32%)
zf-H2C2_2 245..270 CDD:463886 6/24 (25%)
C2H2 Zn finger 261..282 CDD:275368 7/20 (35%)
C2H2 Zn finger 318..338 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

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