DRSC/TRiP Functional Genomics Resources

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Protein Alignment prg and CG15269

DIOPT Version :10

Sequence 1:NP_609232.2 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_609739.2 Gene:CG15269 / 34887 FlyBaseID:FBgn0028878 Length:587 Species:Drosophila melanogaster


Alignment Length:303 Identity:78/303 - (25%)
Similarity:113/303 - (37%) Gaps:47/303 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 YCCNFCNIKLVTRPALISHIKTLHDPDRPYVCAHCRKGFVRRSDLKKHTIVHTGVRPFT--CNVC 299
            |.|..|.........|.:|.||...|  .|.||.|.|||.:..:.|.|..||.|.:.|.  |..|
  Fly   298 YKCRICEKVFGCSETLQAHEKTHKSP--RYECADCGKGFSQLRNYKYHLSVHRGTKEFAAECPEC 360

  Fly   300 SKSFSRNTNLTKHMRIHSGVKPFVCQQCPRSFQTAVEMMRHTRSHGEVKAFQCGRCPYSFSRRDK 364
            .|:|:....|:.|::||...|.:.|..||:||...|....|.|.|..||..:|..|...|||:..
  Fly   361 GKTFNDKGYLSSHLKIHRNRKEYECPYCPKSFNQRVAFNMHVRIHTGVKPHKCNECGKRFSRKML 425

  Fly   365 LIAHQQVHTRRDMEQQQQMGLIPPMEGDLQQQALQAKQKAAAQTKNSRYYHCDVCDRTFQRERDL 429
            |..|.:.|:                                    ..:.|.|.||.::|....::
  Fly   426 LKQHMRTHS------------------------------------GEKPYQCSVCGKSFADRSNM 454

  Fly   430 QRHQALHMD-SLFACKTCNQGFNRREQLQRHELEAHG--PSFTC--GICCISFLHQIELENHLKV 489
            ..|..||.. ..|:|..|.:.|.::..|:.| |..|.  ..:.|  ..|..:|.....:..|.|.
  Fly   455 TLHHRLHSGIKPFSCPLCPKAFTKKHHLKTH-LNYHTGCKPYVCPHPNCNQAFTQSSNMRTHAKK 518

  Fly   490 HQLQHKMAQRAQEAAI-LPLKMAEKAPVAMTAPLVQDPQLVRP 531
            .|.:.........:|: :|.|.....|..:...:.|..|:..|
  Fly   519 CQYRPLDGLTVTSSALPVPGKQQTGPPPTLAMAMAQTFQMPPP 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prgNP_609232.2 zf-AD 16..94 CDD:462262
COG5048 <212..340 CDD:227381 36/104 (35%)
C2H2 Zn finger 239..260 CDD:275368 6/20 (30%)
C2H2 Zn finger 268..288 CDD:275368 8/19 (42%)
C2H2 Zn finger 296..316 CDD:275368 6/19 (32%)
C2H2 Zn finger 324..344 CDD:275368 8/19 (42%)
C2H2 Zn finger 352..372 CDD:275368 7/19 (37%)
C2H2 Zn finger 416..436 CDD:275368 5/19 (26%)
C2H2 Zn finger 443..464 CDD:275368 6/20 (30%)
C2H2 Zn finger 470..490 CDD:275368 5/21 (24%)
CG15269NP_609739.2 C2H2 Zn finger 300..320 CDD:275368 5/19 (26%)
C2H2 Zn finger 327..347 CDD:275368 8/19 (42%)
C2H2 Zn finger 357..377 CDD:275368 6/19 (32%)
COG5048 <370..515 CDD:227381 43/181 (24%)
C2H2 Zn finger 385..405 CDD:275368 8/19 (42%)
C2H2 Zn finger 413..433 CDD:275368 7/19 (37%)
C2H2 Zn finger 441..461 CDD:275368 5/19 (26%)
C2H2 Zn finger 469..489 CDD:275368 6/20 (30%)
C2H2 Zn finger 497..515 CDD:275368 3/17 (18%)
Blue background indicates that the domain is not in the aligned region.

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