DRSC/TRiP Functional Genomics Resources

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Protein Alignment prg and crol

DIOPT Version :10

Sequence 1:NP_609232.2 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_477243.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster


Alignment Length:331 Identity:90/331 - (27%)
Similarity:139/331 - (41%) Gaps:56/331 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 QQSVANN--ANTTEARPKRAFLCQYCDLGFTLPAECQEHELAAHDPNAPYCCNFCNIKLVTRPAL 252
            ::.:||:  ::|.|.    .|.|:.|...|:.......| :..|....|:.|:||:.....:..|
  Fly   401 KEHLANHMRSHTNET----PFRCEICGKSFSRKEHFTNH-ILWHTGETPHRCDFCSKTFTRKEHL 460

  Fly   253 ISHIKTLHDPDRPYVCAHCRKGFVRRSDLKKHTIVHTGVRPFTCNVCSKSFSRNTNLTKHMRIHS 317
            ::|::. |..:.|:.|::|.|.|.|:..|..|...|||..||.|..|:|:|:|..::..|:|.|:
  Fly   461 LNHVRQ-HTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHT 524

  Fly   318 GVKPFVCQQCPRSFQTAVEMMRHTRSHGEVKAFQCGRCPYSFSRRDKLIAHQQVHTRRDMEQQQQ 382
            |..|..|..|.::|.....:..|.|.|......:|..|..:|:|::.|..|.::||         
  Fly   525 GESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHT--------- 580

  Fly   383 MGLIPPMEGDLQQQALQAKQKAAAQTKNSRYYHCDVCDRTFQRERDLQRHQALH-MDSLFACKTC 446
                    ||..                   :.|:.|.:||.|:..|..|...| .|:...|..|
  Fly   581 --------GDSP-------------------HKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVC 618

  Fly   447 NQGFNRREQLQRHELEAH--GPSFTCGICCISFLHQIELENHLKVHQLQHKMAQRAQEAAILPLK 509
            |:.|.|:|.|..|....|  ...|||..|..||    .|:.:|..||..|...|..:.    |. 
  Fly   619 NKPFTRKEHLINHMSRCHTGDRPFTCETCGKSF----PLKGNLLFHQRSHTKGQEMER----PF- 674

  Fly   510 MAEKAP 515
            ..||.|
  Fly   675 ACEKCP 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prgNP_609232.2 zf-AD 16..94 CDD:462262
COG5048 <212..340 CDD:227381 37/127 (29%)
C2H2 Zn finger 239..260 CDD:275368 5/20 (25%)
C2H2 Zn finger 268..288 CDD:275368 7/19 (37%)
C2H2 Zn finger 296..316 CDD:275368 7/19 (37%)
C2H2 Zn finger 324..344 CDD:275368 5/19 (26%)
C2H2 Zn finger 352..372 CDD:275368 6/19 (32%)
C2H2 Zn finger 416..436 CDD:275368 7/19 (37%)
C2H2 Zn finger 443..464 CDD:275368 8/20 (40%)
C2H2 Zn finger 470..490 CDD:275368 6/19 (32%)
crolNP_477243.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368
COG5048 300..723 CDD:227381 90/331 (27%)
C2H2 Zn finger 307..327 CDD:275368
C2H2 Zn finger 335..355 CDD:275368
C2H2 Zn finger 363..383 CDD:275368
C2H2 Zn finger 391..411 CDD:275368 2/9 (22%)
C2H2 Zn finger 419..439 CDD:275368 4/20 (20%)
C2H2 Zn finger 447..467 CDD:275368 5/20 (25%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
C2H2 Zn finger 531..551 CDD:275368 5/19 (26%)
C2H2 Zn finger 559..579 CDD:275368 6/19 (32%)
C2H2 Zn finger 587..607 CDD:275368 7/19 (37%)
C2H2 Zn finger 615..636 CDD:275368 8/20 (40%)
C2H2 Zn finger 644..664 CDD:275368 8/23 (35%)
C2H2 Zn finger 676..696 CDD:275368 3/5 (60%)
C2H2 Zn finger 704..722 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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