Protein Alignment prg and CG3407

DIOPT Version :10

• Sequence 1: NP_609232.2
• Gene: prg / 34177
• FlyBaseID: FBgn0285971
• Length: 558
• Species: Drosophila melanogaster
• Sequence 2: NP_608809.1
• Gene: CG3407 / 33606
• FlyBaseID: FBgn0031573
• Length: 714
• Species: Drosophila melanogaster
• Alignment Length: 492
• Identity: 110/492 - (22%)
• Similarity: 159/492 - (32%)
• Gaps: 156/492 - (31%)

  Fly    85 QEREQSLQEQLKEMIKD---------HPKHRPGLNGNPGVFVPEEG-------CIIVEVDPENLA 133
            |::.|..|.:|.::.:|         :..|......|.||.:...|       .::|.      .
  Fly   221 QDKLQQEQAKLDQVFQDVQLNFENFHNISHHVNDVANVGVNMVLHGQATDKLNAVVVN------T 279

  Fly   134 ESSEEEFALGSDGEYENYDDDDEEEEEDYDEEDEED--------------------GQNGEDVDM 178
            .|:.....:..|.|:.:.:|..|......|:...||                    ..|..|:..
  Fly   280 SSTPNSVPVVDDVEFSDTEDMLEGIRNVVDKVSIEDTCDELVDLELTSSGMTAPWFNNNFRDITF 344

  Fly   179 PLGMDAAQMAAQQSVANNANTTEARPKRAFLCQYCDLGFTLPAECQEHELA--------AHDPN- 234
            |    |..:..:...|::...|....:...:..:..|.|..|.:....|.|        |.:||
  Fly   345 P----ALLLPGEPPPASSEPATPLLKENPHVGDHMALDFLSPEKADPQEEAKLEKTLSKACEPNE 405

  Fly   235 -----APYCCNFCNIKLVTRPALISHIKTLH-----------------------------DPD-- 263
                 ||..|....|..|  |...|.|:.|.                             |||
  Fly   406 QTLLVAPPACQTPPIPTV--PPANSSIEQLRRSPLELSEAFKLEEDDMTDSRPASSFEEGDPDAE 468

  Fly   264 ------------------------RPYVCAHCRKGFVRRSDLKKHTIVHTGVRPFTCNVCSKSFS 304
                                    |.:.|..|.:.|...:.||.|...|...|...|:.|.:||.
  Fly   469 EPNECFQMEVLDTSLTEEAENKTRRKHFCDKCNRDFNSYNALKYHQYTHNQERSHKCDSCERSFY 533

  Fly   305 RNTNLTKHMRIHSGVKPFVCQQCPRSFQTAVEMMRHTRS-HGEVKAFQCGRCPYSFSRRDKLIAH 368
            ..:.|..|.|.|||||||.|.:|...|:...::..|..| |.:|||..|..|..|||||..|:.|
  Fly   534 TQSALKAHERTHSGVKPFKCDKCEFQFRQWGDLKYHIISRHSDVKAHMCEFCGKSFSRRYSLVVH 598

  Fly   369 QQVHTRRDMEQQQQMGLIPPMEGDLQQQALQAKQKAAAQTKNSRYYHCDVCDRTFQRERDLQRHQ 433
            :::|||.                                 ||   |.|..||:||:....|..|.
  Fly   599 RRIHTRE---------------------------------KN---YACQYCDKTFRASSYLLSHI 627

  Fly   434 ALHM-DSLFACKTCNQGFNRREQLQRHELEAHGPSFT 469
            .:|. :..:.|..|.:.|.....|:||. ..|.||.|
  Fly   628 KVHTGERPYECSICEKKFRVSGDLKRHS-RIHDPSRT 663

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
prg	NP_609232.2	zf-AD	16..94	CDD:462262	3/8 (38%)
		COG5048	<212..340	CDD:227381	46/196 (23%)
		C2H2 Zn finger	239..260	CDD:275368	6/20 (30%)
		C2H2 Zn finger	268..288	CDD:275368	6/19 (32%)
		C2H2 Zn finger	296..316	CDD:275368	7/19 (37%)
		C2H2 Zn finger	324..344	CDD:275368	5/20 (25%)
		C2H2 Zn finger	352..372	CDD:275368	9/19 (47%)
		C2H2 Zn finger	416..436	CDD:275368	7/19 (37%)
		C2H2 Zn finger	443..464	CDD:275368	6/20 (30%)
		C2H2 Zn finger	470..490	CDD:275368	110/492 (22%)
CG3407	NP_608809.1	COG5048	<494..656	CDD:227381	60/198 (30%)
		C2H2 Zn finger	497..517	CDD:275368	6/19 (32%)
		C2H2 Zn finger	525..545	CDD:275368	7/19 (37%)
		C2H2 Zn finger	555..574	CDD:275371	4/18 (22%)
		C2H2 Zn finger	582..602	CDD:275368	9/19 (47%)
		C2H2 Zn finger	610..630	CDD:275368	7/19 (37%)
		C2H2 Zn finger	638..658	CDD:275368	6/20 (30%)