DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment prg and CG2202

DIOPT Version :10

Sequence 1:NP_609232.2 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_572657.2 Gene:CG2202 / 32014 FlyBaseID:FBgn0030240 Length:889 Species:Drosophila melanogaster


Alignment Length:537 Identity:120/537 - (22%)
Similarity:197/537 - (36%) Gaps:140/537 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QDQDVSTCRLCHHNTDPNSLNIFDDTVQFCKDVSIAEVSKSLWSVQYDRNECLSELICSRCLEIL 74
            :|:.|.....|  ||:|.|.|..|.     ::.:.|  :::|| :......||.       .|.:
  Fly   282 EDEVVGEAFQC--NTNPISSNEDDG-----EEANGA--NQTLW-LHIKPEPCLE-------AEEV 329

  Fly    75 EEAFELR-KGMQEREQSLQEQLKEMIKDHPKHRPGLNGNPGVFVPEEGCIIVEVDPENLAESSEE 138
            :.|.:|: :..:.|.:..:.|.:..|....|:.....|:....:.||..:   |..::.|....|
  Fly   330 DLAMQLKLEKKRRRREKAEAQAETSIDRTVKNEHIAIGDSQFSIKEENQL---VGSDDEAPMGVE 391

  Fly   139 EF---------ALGSDGEYENYDDDDEEEEEDYDEEDEEDGQNGEDVDMPL------GMDAAQMA 188
            :|         .|..:..::.:.|||.:.::|.|::||||..:.:|.:..|      |....:.|
  Fly   392 DFMKLHVSGELPLSDEERFDGFADDDSDLDDDDDDDDEEDAGDDDDGEFRLKQEPLDGEKPLKKA 456

  Fly   189 AQQSVANNANTTEARP-------KRAF-------------------------------------- 208
            .........|..|..|       :|.|                                      
  Fly   457 KSGRRRRRRNKDEPNPDNRCEVCQRTFSRHCHLLRHKLSHLEKKPHNCPHCPKAFARSDHLKAHV 521

  Fly   209 ---------LCQYCDLGFTLPAECQEHELAAH-----DPN-------APYCCNFCNIKLVTRPAL 252
                     .|..|:..|:.....:.|:::.|     :|.       |.:.|.:|:.:..::..|
  Fly   522 QSLHSNKEHKCSLCEAAFSRLDALERHKVSKHNGEGLEPGSELKLQLAEHTCEYCSKRFSSKTYL 586

  Fly   253 ISHIKTLHDPDRPYVCAHCRKGFVRRSDLKKHTIVHTGVRPFTCNVCSKSFSRNTNLTKHMRIHS 317
            ..|  ||...|..|.|..|.:.|..|:.|::|...|||.|.|.|.:|..||:||..|..|||.|:
  Fly   587 RKH--TLLHTDFLYACKTCDETFRERAQLREHEKTHTGQRNFLCCICGDSFARNDYLRVHMRRHN 649

  Fly   318 GVKPFVCQQCPRSFQTAVEMMRHTRSHGEVKAFQCGRCPYSFSRRDKLIAHQQVHTRRDMEQQQQ 382
            |.||:.|:.|.::|..|.::..|.|.|...|...|..|..||.|...|..|.:.||         
  Fly   650 GEKPYKCRFCVKAFPRATDLKVHERYHTGTKPNLCNTCGKSFHRAYNLTIHMRTHT--------- 705

  Fly   383 MGLIPPMEGDLQQQALQAKQKAAAQTKNSRYYHCDVCDRTFQRERDLQRHQALHMDSLFACKTCN 447
                                       ..|.|.||.|.::|.:..||:.|...|....:.|..|:
  Fly   706 ---------------------------GERPYKCDQCPKSFTQSNDLKAHIRRHTGERYKCPHCD 743

  Fly   448 QGFNRREQLQRHELEAH 464
            ..|.:...::.|.:.||
  Fly   744 AYFLQLYNMRNHCMSAH 760

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prgNP_609232.2 zf-AD 16..94 CDD:462262 16/78 (21%)
COG5048 <212..340 CDD:227381 43/139 (31%)
C2H2 Zn finger 239..260 CDD:275368 5/20 (25%)
C2H2 Zn finger 268..288 CDD:275368 6/19 (32%)
C2H2 Zn finger 296..316 CDD:275368 10/19 (53%)
C2H2 Zn finger 324..344 CDD:275368 6/19 (32%)
C2H2 Zn finger 352..372 CDD:275368 7/19 (37%)
C2H2 Zn finger 416..436 CDD:275368 7/19 (37%)
C2H2 Zn finger 443..464 CDD:275368 4/20 (20%)
C2H2 Zn finger 470..490 CDD:275368
CG2202NP_572657.2 zf-AD 45..121 CDD:214871
C2H2 Zn finger 150..171 CDD:275368
C2H2 Zn finger 192..213 CDD:275370
C2H2 Zn finger 221..239 CDD:275370
COG5048 <443..730 CDD:227381 73/324 (23%)
C2H2 Zn finger 476..496 CDD:275368 2/19 (11%)
C2H2 Zn finger 504..525 CDD:275368 0/20 (0%)
C2H2 Zn finger 532..548 CDD:275368 3/15 (20%)
C2H2 Zn finger 573..593 CDD:275368 6/21 (29%)
C2H2 Zn finger 600..620 CDD:275368 6/19 (32%)
C2H2 Zn finger 628..648 CDD:275368 10/19 (53%)
C2H2 Zn finger 656..676 CDD:275368 6/19 (32%)
C2H2 Zn finger 684..704 CDD:275368 7/19 (37%)
C2H2 Zn finger 712..732 CDD:275368 7/19 (37%)
C2H2 Zn finger 739..755 CDD:275368 3/15 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.