DRSC/TRiP Functional Genomics Resources

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Protein Alignment prg and Zbtb38

DIOPT Version :10

Sequence 1:NP_609232.2 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster
Sequence 2:XP_063121645.1 Gene:Zbtb38 / 315936 RGDID:1310136 Length:1217 Species:Rattus norvegicus


Alignment Length:348 Identity:84/348 - (24%)
Similarity:142/348 - (40%) Gaps:48/348 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 SELICSRCLEILEEAFELRKGMQEREQSLQEQLKEMIKDHPKHR-PGLNGNPGVFVPEEGCIIVE 126
            :|.|..|  .||......::|.:.:.|..:|.|       |:.. |...|:..:.:.:..|:.:.
  Rat   851 NEAIVKR--HILGSKLFYKRGRKPKYQMQEETL-------PRESDPETRGDSPLGLCQADCVEMS 906

  Fly   127 VDPENLAESSEEEFALGSDGEYENYDDDDEEEEEDYDEEDEEDGQNGEDVDM-----PLGMDAAQ 186
               |...|.|:::........|.||....:.::.....:.:...:.|....:     |..:|.|:
  Rat   907 ---EAFDEVSDQDSTDKPWRPYYNYKPKKKSKQLRKIRKVKWRKERGSRSPVGRRRYPAELDRAE 968

  Fly   187 MAAQQSVANNANTTEAR--PKRA-----------FLCQYCD------LGFTLPAECQEHELAAHD 232
            |..::..|......|.:  |.:|           ..|:.||      .|    ||.:.|:   |.
  Rat   969 MGRRRYPAELDRCAEVKLPPDKASEEEENKEMPKLQCELCDGDKAAGAG----AEGKPHQ---HL 1026

  Fly   233 PNAPYCCNFCNIKLVTRPALISHIKTLHDPDRPYVCAHCRKGFVRRSDLKKHTIVHTGVRPFTCN 297
            ...||.|..|..:..:...|..|:: .|..::||.|..|.:.|..:.:|:||..:|.||:.|.|.
  Rat  1027 TLKPYICELCAKQFQSSSTLKMHMR-CHTGEKPYQCKTCGRRFSVQGNLQKHERIHLGVKEFICQ 1090

  Fly   298 VCSKSFSRNTNLTKHMRIHSGVKPFVCQQCPRSFQTAVEMMRHTRSH---GEVKAFQCGRCPYSF 359
            .|:|:|:.|..|..|.|||:|.|.:.||.|.:.|........|.|.|   .:.|.|.|.:||...
  Rat  1091 YCNKAFTLNETLKIHERIHTGEKRYHCQFCFQGFLYLSTKRNHERRHVREHDGKGFACFQCPKIC 1155

  Fly   360 SRRDKLIAHQQVHTRRDMEQQQQ 382
            .....|..||:.|..:.:.:|::
  Rat  1156 KTAAALRMHQKKHLFKTLTKQEE 1178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prgNP_609232.2 zf-AD 16..94 CDD:462262 7/30 (23%)
COG5048 <212..340 CDD:227381 42/133 (32%)
C2H2 Zn finger 239..260 CDD:275368 4/20 (20%)
C2H2 Zn finger 268..288 CDD:275368 6/19 (32%)
C2H2 Zn finger 296..316 CDD:275368 8/19 (42%)
C2H2 Zn finger 324..344 CDD:275368 6/19 (32%)
C2H2 Zn finger 352..372 CDD:275368 6/19 (32%)
C2H2 Zn finger 416..436 CDD:275368
C2H2 Zn finger 443..464 CDD:275368
C2H2 Zn finger 470..490 CDD:275368
Zbtb38XP_063121645.1 None
Blue background indicates that the domain is not in the aligned region.

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