DRSC/TRiP Functional Genomics Resources

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Protein Alignment prg and CG32767

DIOPT Version :10

Sequence 1:NP_609232.2 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_572203.2 Gene:CG32767 / 31430 FlyBaseID:FBgn0052767 Length:1281 Species:Drosophila melanogaster


Alignment Length:306 Identity:66/306 - (21%)
Similarity:104/306 - (33%) Gaps:68/306 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 AESSEEEFALGSDGEYENYD-------DDDEEEEEDYDEEDEEDGQNGEDVDMPLGMDAAQMAAQ 190
            |.::|::.||..:.:.:..:       ...:::|:...::.::..|..:...........|...|
  Fly   399 AAAAEQQLALALEQQRQQQEQQAQQQRQQQQQQEQQRQQQQQQQQQQQQQAQQEQQRQQQQQLQQ 463

  Fly   191 Q----------------SVANNANTTEAR---------------------------PKRAF---- 208
            |                |..||.:||.:.                           .|..|    
  Fly   464 QQQQQQTHPVKHSASGSSSTNNNSTTNSTNSNNNTPAATATVTTSYQCVECVEKFDSKELFDIHR 528

  Fly   209 -------LCQYCDLGFTLPAECQEHELAAHDPNAPYCCNFCNIKLVTRPALISHIK--TLHDPDR 264
                   .|..|::........::|.|..    .||.|..|...:..||..|.|::  |....:|
  Fly   529 SGHANNMKCAICNMVLKSLKNYEKHCLRC----KPYECQICGRVVRFRPNFIKHMRVHTGQQSER 589

  Fly   265 -PYVCAHCRKGFVRRSDLKKHTIVHTGVRPFTCNVCSKSFSRNTNLTKHMRIHSGVKPFVCQQCP 328
             .|.|..|.|.|:.....|.|..:|......||.:|.|.||...:|..|.::|||||...|..|.
  Fly   590 HKYKCEVCHKEFMSFEYFKVHKKIHNENVNLTCEICGKVFSALASLRGHSKLHSGVKLHKCDVCG 654

  Fly   329 RSFQTAVEMMRHTRSHGEVKAFQCGRCPYSFSRRDKLIAHQQVHTR 374
            :.|.....:..|.|:|.....|:|..|......:..|..|.|||.|
  Fly   655 KGFGQRYNLKIHARTHTGDFPFECKICKKKLHTQSSLQTHMQVHLR 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prgNP_609232.2 zf-AD 16..94 CDD:462262
COG5048 <212..340 CDD:227381 37/130 (28%)
C2H2 Zn finger 239..260 CDD:275368 7/22 (32%)
C2H2 Zn finger 268..288 CDD:275368 6/19 (32%)
C2H2 Zn finger 296..316 CDD:275368 7/19 (37%)
C2H2 Zn finger 324..344 CDD:275368 5/19 (26%)
C2H2 Zn finger 352..372 CDD:275368 5/19 (26%)
C2H2 Zn finger 416..436 CDD:275368
C2H2 Zn finger 443..464 CDD:275368
C2H2 Zn finger 470..490 CDD:275368
CG32767NP_572203.2 C2H2 Zn finger 594..614 CDD:275368 6/19 (32%)
C2H2 Zn finger 622..642 CDD:275368 7/19 (37%)
SUF4-like 648..>698 CDD:411020 12/49 (24%)
C2H2 Zn finger 650..671 CDD:411020 5/20 (25%)
C2H2 Zn finger 650..670 CDD:275368 5/19 (26%)
C2H2 Zn finger 678..698 CDD:411020 5/19 (26%)
C2H2 Zn finger 678..698 CDD:275368 5/19 (26%)
C2H2 Zn finger 537..557 CDD:275368 4/19 (21%)
C2H2 Zn finger 562..582 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

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