DRSC/TRiP Functional Genomics Resources

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Protein Alignment prg and Zfp280c

DIOPT Version :10

Sequence 1:NP_609232.2 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001414585.1 Gene:Zfp280c / 302812 RGDID:1564669 Length:753 Species:Rattus norvegicus


Alignment Length:401 Identity:77/401 - (19%)
Similarity:115/401 - (28%) Gaps:154/401 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 CQYCDLGFTLPAECQEHELAAHDP-NAPYCCNFCNIKLVTRPALISHIKTLHDPDRPYVCAHCRK 273
            ||:|...:..|.:.|.|..:.|.| :....|..|.:...|...|:.|:|..|.|           
  Rat   368 CQHCYRQYPNPFQLQCHIESTHTPHDFSTICKICELSFETEHLLLQHMKDTHKP----------- 421

  Fly   274 GFVRRSDLKKHTIVHTGVRPFTCNVCSKSFSRNTNLTKHMR-IHSGVKPFVCQQCPRSFQTAVEM 337
                            |..|:.|.||....|..:::..|.| .|...|..:|..|.:..:.|...
  Rat   422 ----------------GEMPYICQVCQFRSSIFSDVETHFRSSHENTKNLLCPFCLKVSRMATPY 470

  Fly   338 MRHTRSHGEVKAFQCGRCPYSFSRRDKLIAHQQVHTRRDMEQQQQMGLIP--------------- 387
            |.|...|.:...::|.:|...|....:.|.|:..| |..::.::..||.|               
  Rat   471 MNHYMRHQKKGIYRCPKCRLQFLTSKEKIDHKLEH-RTFIKPKELEGLPPGTKVTIRASLGSIQS 534

  Fly   388 ----PMEGDLQQQALQ------------------------------------------------- 399
                |....:...:||                                                 
  Rat   535 RSSSPPSSTIPSTSLQLSVPKSKTTTTKNTTTKNNSKVSANKVTTTSPQTMSTTTGKTNASKPGT 599

  Fly   400 --AKQKAAAQTKNSRYYHCDVCDRTFQRE-----RDLQRHQALH-----------MDSLFA---- 442
              .|.||....|..|       .||.:.:     |:|:.||..|           ..|.|:    
  Rat   600 GTTKSKAKPSNKQKR-------QRTRKNKFSIDLRNLRCHQGTHTCIECHSKIKDFSSHFSTYIN 657

  Fly   443 ---CK---TCNQGFNRR---------EQL---QRHELEAHGPSFTCGICCISFLHQI----ELEN 485
               ||   .||:.|...         :||   ::|.....|.:..|..|  .||...    .:..
  Rat   658 CDFCKYTTNCNKAFTNHMSSHNDHPSKQLCIFKKHSRALRGITLVCLKC--DFLADTSGLDRMAK 720

  Fly   486 HL---KVHQLQ 493
            ||   |.|..|
  Rat   721 HLNQRKTHTCQ 731

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prgNP_609232.2 zf-AD 16..94 CDD:462262
COG5048 <212..340 CDD:227381 28/129 (22%)
C2H2 Zn finger 239..260 CDD:275368 6/20 (30%)
C2H2 Zn finger 268..288 CDD:275368 0/19 (0%)
C2H2 Zn finger 296..316 CDD:275368 6/20 (30%)
C2H2 Zn finger 324..344 CDD:275368 5/19 (26%)
C2H2 Zn finger 352..372 CDD:275368 5/19 (26%)
C2H2 Zn finger 416..436 CDD:275368 6/24 (25%)
C2H2 Zn finger 443..464 CDD:275368 8/35 (23%)
C2H2 Zn finger 470..490 CDD:275368 7/26 (27%)
Zfp280cNP_001414585.1 None
Blue background indicates that the domain is not in the aligned region.

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