DRSC/TRiP Functional Genomics Resources

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Protein Alignment prg and Zfp280b

DIOPT Version :10

Sequence 1:NP_609232.2 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001406443.1 Gene:Zfp280b / 294343 RGDID:1565460 Length:532 Species:Rattus norvegicus


Alignment Length:383 Identity:85/383 - (22%)
Similarity:134/383 - (34%) Gaps:113/383 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 VSKSLWSVQYDRNECLSELICSRCLEILEEAFEL--------RKGMQEREQSLQ--EQLKEMIKD 101
            |||..:|:...|.|        |.:||:||....        ....|:|..||:  :.|...:..
  Rat   176 VSKCHFSINPQRPE--------RSIEIVEELSSALPPSGPFHTSNAQQRTPSLEAPKSLNLFVNG 232

  Fly   102 HPKHRPGLNGNPGVFVPEEGCIIVEVDPENLAESSEEEF--------ALGSDGEYENYDDDDEEE 158
            .|     |:|:|  ..|.:....|:.|..:||  |.|.|        .|.||..|..|..:.:.|
  Rat   233 AP-----LSGDP--VHPRQDSGSVDTDFSSLA--SPETFDPKKGSLTLLLSDFYYGQYKGEGKPE 288

  Fly   159 EE--------------------DYDEEDEEDGQNGEDVDMPLGMDAAQMAAQQSVANNANTTEAR 203
            ::                    ::.:...|..:.|.|                 .|..::||   
  Rat   289 QKTHTTFKCPSCSKALKNVKFMNHTKHHLELERQGSD-----------------EAWESHTT--- 333

  Fly   204 PKRAFLCQYCDLGFTLPAECQEHELAAHD-PNAPYCCNFCNIKLVTRPALISHIKTLHDP-DRPY 266
                  |..|...|..|.:.:.|....|. |:....|..|.:...|...|:.|:|..|.| :.||
  Rat   334 ------CLRCHRLFASPFQLECHIDRVHTAPDPCVVCKICELSFETEQVLLEHMKDNHKPGEMPY 392

  Fly   267 VCAHCRKGFVRRSDLKKHTIVHTGVRPFTCNVCSKSFSRNTNLTKHMRIHSGVKPFVCQQCPRSF 331
            ||..|:......:|::.|         ||                  :.|...|..:|..|.:.|
  Rat   393 VCQVCKYRSSVFADVETH---------FT------------------KCHVNTKNLLCPFCLKIF 430

  Fly   332 QTAVEMMRHTRSHGEVKAFQCGRCPYSF-SRRDKLIAHQQVHTRRDMEQQQQMGLIPP 388
            :|.:..|.|.|.|.|....||.:|...| :.::|:....|.|  :...:.:|:..:||
  Rat   431 RTGMPYMCHCRGHWERNGHQCSKCRLQFLTFKEKMEHKTQCH--QMFRKPKQLEGLPP 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prgNP_609232.2 zf-AD 16..94 CDD:462262 15/56 (27%)
COG5048 <212..340 CDD:227381 30/129 (23%)
C2H2 Zn finger 239..260 CDD:275368 6/20 (30%)
C2H2 Zn finger 268..288 CDD:275368 4/19 (21%)
C2H2 Zn finger 296..316 CDD:275368 0/19 (0%)
C2H2 Zn finger 324..344 CDD:275368 7/19 (37%)
C2H2 Zn finger 352..372 CDD:275368 5/20 (25%)
C2H2 Zn finger 416..436 CDD:275368
C2H2 Zn finger 443..464 CDD:275368
C2H2 Zn finger 470..490 CDD:275368
Zfp280bNP_001406443.1 DUF4195 52..219 CDD:463993 13/50 (26%)
C2H2 Zn finger 334..355 CDD:275368 5/20 (25%)
C2H2 Zn finger 364..385 CDD:275368 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.

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