DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat2 and Lpcat2b

DIOPT Version :10

Sequence 1:NP_609231.2 Gene:Agpat2 / 34176 FlyBaseID:FBgn0026718 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_081875.1 Gene:Lpcat2b / 70902 MGIID:1918152 Length:516 Species:Mus musculus


Alignment Length:306 Identity:64/306 - (20%)
Similarity:100/306 - (32%) Gaps:97/306 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 VCRNSRATSWRHTTTNAQSASCTTARQCVEI----------PFLALSQDSVLKDTCLVPRTRGFP 167
            :|.:|.:....|..|...|.:..:|...:.:          .||.:..||.:|.....|:|..| 
Mouse    58 LCFSSVSDFHAHFKTLISSINSPSASYILRLANRLYGEKTFSFLPMYVDSTMKLYHAEPQTVDF- 121

  Fly   168 KKLPKLSLTPAQGVKVTKLRANTFTFIATDGSEGWFSDGW--KSHSNKTQDM----VVLEGANVT 226
                              :||      |.|..:  |.:.|  |...|:.:|:    ||.|...:.
Mouse   122 ------------------IRA------ADDSRQ--FINKWVEKQTENQIKDLLQPGVVNEMTRLL 160

  Fly   227 LTCAA--TGVPEPTVNWKREGDKSITSVEDSGITSHDGAMLHIYHIQRHNAGSYHCIASNGVPPT 289
            |..|.  .|      ||....|...|......|..::...:.:.. |..|. .|.||      |.
Mouse   161 LVNAIYFKG------NWMHTFDAHATKEMPFKINQNESRPVQMMD-QVENF-PYRCI------PE 211

  Fly   290 VSKRIIVTVNFQPIVRLPTRQYYAELGGRVTLECHSEAQPNSINY----WMKGKGEIILQGGTYD 350
            ...:::         .||..|  .||...:.|       |:.|.|    .:|.:.|:.||     
Mouse   212 YKLQVL---------ELPYTQ--QELSMLILL-------PDEIKYGSDPLLKLESELNLQ----- 253

  Fly   351 STLEDHVFKVTM----RITIRLEKASDYGVYKCVAKNSLGTTEESV 392
             .|.|...:..|    :|.:||.|      :|...::.|..|.|.:
Mouse   254 -KLLDWTSRGKMDTWRKIIVRLPK------FKLEIESCLSETLEKM 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat2NP_609231.2 PlsC 47..261 CDD:439974 34/165 (21%)
Lpcat2bNP_081875.1 LPLAT_LPCAT1-like 111..323 CDD:153253 53/253 (21%)
HXXXXD motif 142..147 1/4 (25%)
EFh_PEF <318..445 CDD:355382
EF-hand motif 321..350 CDD:320054
EF-hand motif 352..381 CDD:320054
FRQ1 <392..487 CDD:444056
EF-hand motif 392..420 CDD:320054
Blue background indicates that the domain is not in the aligned region.

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