DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat2 and Lpcat2b

DIOPT Version :9

Sequence 1:NP_001162912.1 Gene:Agpat2 / 34176 FlyBaseID:FBgn0026718 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_081875.1 Gene:Lpcat2b / 70902 MGIID:1918152 Length:516 Species:Mus musculus


Alignment Length:257 Identity:56/257 - (21%)
Similarity:114/257 - (44%) Gaps:41/257 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ACTCEVIG-------LACVVALILSATAKAPYQMRMFFIFFGAGLIVFLCVPFMILRP-RDYRNA 58
            |||. ::|       ::|:|.|::              :.:...::..:.:|....:| |.:|..
Mouse    52 ACTI-ILGTVLVPVRVSCIVFLLI--------------LLWPVAVLSAINLPTQPTKPIRRWRKH 101

  Fly    59 LFPS---WCFRQLCRLVGITMEVRGLENVRKDHGAVVIMNHQSAVDLCVLAYLWPVIGRATVVSK 120
            |..|   :.||......|..::|:|.:..|::....|...|.:..|...:.    |.|..:|||.
Mouse   102 LIKSALVFLFRLGFFFAGFLVKVKGKKATREEAPIFVSAPHSTFFDAIAVV----VAGLPSVVSD 162

  Fly   121 KEVLYIPFFGIGAWLWGTLYIDR----SRKTDSINSLQKEAKAIQERNCKLLLFPEGTRNSKDSL 181
            .::..:|..|....:...:.:.|    |||| :.|.:.:..|: :.:..::|:||||...::..|
Mouse   163 SQLARVPLAGKCILVTQPVLVKREDPNSRKT-TRNEILRRVKS-KMKWPQILIFPEGLCTNRSCL 225

  Fly   182 LPFKKGSFHIALQGKSPVQPVVISKYSFMDDEKKTFRPGHALIHILPEVSTEKYKREDVQLL 243
            :.||.|:|...:    |||||::...:.:|....|:. |.:...:.....::.:.|.:|:.:
Mouse   226 VTFKLGAFSPGV----PVQPVLLRYPNSLDTVTWTWN-GFSGFQVCMLTLSQLFTRVEVEFM 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat2NP_001162912.1 LPLAT_AGPAT-like 65..248 CDD:153251 43/183 (23%)
Lpcat2bNP_081875.1 PlsC 65..307 CDD:223282 52/243 (21%)
LPLAT_LPCAT1-like 111..323 CDD:153253 43/183 (23%)
HXXXXD motif 142..147 1/4 (25%)
EFh 392..454 CDD:238008
EF-hand_7 392..453 CDD:290234
EFh 429..487 CDD:298682
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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