DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat2 and lpcat2

DIOPT Version :9

Sequence 1:NP_001162912.1 Gene:Agpat2 / 34176 FlyBaseID:FBgn0026718 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_001018492.1 Gene:lpcat2 / 553683 ZFINID:ZDB-GENE-050522-229 Length:529 Species:Danio rerio


Alignment Length:242 Identity:56/242 - (23%)
Similarity:101/242 - (41%) Gaps:63/242 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 VGITMEVRGLENVRKDHGAVVIMNHQSAVD--LCVLAYLWPVIGRATVVSKKEVLYIPFFGIGAW 134
            :|..:.|:|.:....:...:.:..|.|..|  .|:.:      |..:.||:.|.|..|.||....
Zfish   104 MGFKVVVKGKKASTLEAPILAVAPHSSFFDAIACIES------GLPSTVSRIESLEAPIFGRFLR 162

  Fly   135 LWGTLYIDRS---RKTDSINSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFHIALQGK 196
            ....:.:.|:   .:.::|..:::.||: .....::|:|||||..::..|:.||:|.|...:   
Zfish   163 CVQPVLVSRTDPDSRRNTIIEIERRAKS-GGHWPQVLIFPEGTCTNRSCLITFKQGGFVPGV--- 223

  Fly   197 SPVQPVVISKYSFMDDEKKTFR-PGHALIHIL---------------PEVSTEKYKR-------- 237
             |||||:|...:.:|....|:: |..|.:.:|               |:|.||..|:        
Zfish   224 -PVQPVLIRYPNKLDTVTWTWQGPKSARLLLLTLCQLCTTVEVEFLPPQVPTEMEKKCPLKFAQS 287

  Fly   238 ------------------EDVQLLI--DECQSIMQ---TEYTKLSKE 261
                              ||.:|:|  .|....|:   .|:||:|::
Zfish   288 VRAVMAKSLKLPVTDHTYEDCRLMIAAGELTLPMEAGLVEFTKISRK 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat2NP_001162912.1 LPLAT_AGPAT-like 65..248 CDD:153251 51/224 (23%)
lpcat2NP_001018492.1 PlsC 49..297 CDD:223282 46/203 (23%)
LPLAT_LPCAT1-like 98..309 CDD:153253 48/215 (22%)
HXXXXD motif. /evidence=ECO:0000250|UniProtKB:Q3TFD2 128..133 2/4 (50%)
EGTC motif 202..205 2/2 (100%)
EFh 316..406 CDD:298682 6/19 (32%)
EFh 378..440 CDD:238008
EF-hand_7 378..435 CDD:290234
EF-hand_7 415..473 CDD:290234
EFh 418..473 CDD:238008
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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