DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat2 and lclat1

DIOPT Version :10

Sequence 1:NP_609231.2 Gene:Agpat2 / 34176 FlyBaseID:FBgn0026718 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_998435.1 Gene:lclat1 / 406554 ZFINID:ZDB-GENE-081211-2 Length:388 Species:Danio rerio


Alignment Length:164 Identity:44/164 - (26%)
Similarity:77/164 - (46%) Gaps:25/164 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 FFIF------FGAGLIVFLCVPFMILRPRDYR---NALFPSWCFRQLCRL---VGITMEVRGLEN 83
            |.:|      ||:..::...:|.|:|.|..||   :.:..:|....:..|   :|:.:.|.| :.
Zfish     9 FLLFLLLGSVFGSVFMLGPLLPLMLLSPSRYRWITDRIVATWLTLPVALLELVLGVKVVVTG-DG 72

  Fly    84 VRKDHGAVVIMNHQSAVD-----LCVLAYLWPVIGRATVVSKKEVLYIPFFGIGAWLWGTLYIDR 143
            ......:|:||||::.:|     .|:|.|.:  :.:..:..|..:..:|.||....:...::|.|
Zfish    73 FIPGERSVIIMNHRTRLDWMFLWCCLLRYSY--LRQEKICLKAALKSVPGFGWAMQVASFIFIQR 135

  Fly   144 ---SRKTDSINSLQKEAKAIQERNCKLLLFPEGT 174
               ..:|...|.||...: |:| ..:||||||||
Zfish   136 RWEDDRTHMSNMLQYFCR-IRE-PVQLLLFPEGT 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat2NP_609231.2 PlsC 47..261 CDD:439974 39/142 (27%)
lclat1NP_998435.1 LPLAT_LCLAT1-like 55..248 CDD:153252 33/118 (28%)
HXXXXD motif. /evidence=ECO:0000250|UniProtKB:Q9D517 85..90 1/4 (25%)
Acyltransf_C 233..>283 CDD:465006
Blue background indicates that the domain is not in the aligned region.

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