DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat2 and Lpcat1

DIOPT Version :9

Sequence 1:NP_001162912.1 Gene:Agpat2 / 34176 FlyBaseID:FBgn0026718 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_001094205.1 Gene:Lpcat1 / 361467 RGDID:1311599 Length:534 Species:Rattus norvegicus


Alignment Length:298 Identity:75/298 - (25%)
Similarity:124/298 - (41%) Gaps:80/298 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LILSATAKAP--------YQMRMFFIFFGAGLIVFLCVPFMI---LRPRDYRNALFPSWCFRQ-- 67
            |.|||..||.        :.:|:.|    |..::.|..||.:   |.|.| :....|...:|:  
  Rat    36 LRLSALQKAQVAFMTLTLFPIRLLF----AAFMMLLAWPFALVASLGPPD-KEPEQPLALWRKVV 95

  Fly    68 --LCRLVGITM---------EVRGLENVRKDHGAVVIMNHQSAVDLCVLAYLWPV-IGRATVVSK 120
              |.:.:..||         .|:|.:.:..:...:.:..|.|..|..      || :..:::|.|
  Rat    96 DFLLKAIMRTMWFAGGFHRVAVKGRQALPTEAAILTLAPHSSYFDAI------PVTMTMSSIVMK 154

  Fly   121 KEVLYIPFFGIGAWLWGTL-------YIDRSRKTDSINSLQKEAKAIQERNCK---LLLFPEGTR 175
            .|...||       :||||       ::.||.: ||.....:|.|...:.|.|   :::|||||.
  Rat   155 AESRDIP-------IWGTLIRYIRPVFVSRSDQ-DSRRKTVEEIKRRAQSNGKWPQIMIFPEGTC 211

  Fly   176 NSKDSLLPFKKGSFHIALQGKSPVQPVVISKYSFMDDEKKTFRPGHAL---------------IH 225
            .::..|:.||.|:|   :.| .||||||:...:.:|....|::...||               |.
  Rat   212 TNRTCLITFKPGAF---IPG-VPVQPVVLRYPNKLDTITWTWQGPGALKILWLTLCQFQNQVEIE 272

  Fly   226 ILP-EVSTEKYKR------EDVQLLIDECQSIMQTEYT 256
            .|| ...:|:.||      .:|:.::.:...:..|:||
  Rat   273 FLPVYCPSEEEKRNPALYASNVRRVMAKALGVSVTDYT 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat2NP_001162912.1 LPLAT_AGPAT-like 65..248 CDD:153251 56/228 (25%)
Lpcat1NP_001094205.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25
PlsC 59..>242 CDD:223282 54/205 (26%)
LPLAT_LPCAT1-like 103..314 CDD:153253 57/226 (25%)
HXXXXD motif. /evidence=ECO:0000250|UniProtKB:Q3TFD2 135..140 2/4 (50%)
EFh <350..412 CDD:298682
EFh 384..446 CDD:298682
EF-hand_7 421..479 CDD:290234
EF-hand_8 432..483 CDD:290545
Di-lysine motif. /evidence=ECO:0000250|UniProtKB:Q3TFD2 531..534
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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