DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Agpat2 and Agpat3

DIOPT Version :10

Sequence 1:NP_609231.2 Gene:Agpat2 / 34176 FlyBaseID:FBgn0026718 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_001099848.1 Gene:Agpat3 / 294324 RGDID:1305787 Length:376 Species:Rattus norvegicus


Alignment Length:226 Identity:59/226 - (26%)
Similarity:90/226 - (39%) Gaps:61/226 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LSATAKAPYQMRMF--FIFFGAGLIV---FLCVPFMILRPRD---YR--NALFPSWCFRQL---- 68
            |.|..|..:.:.:.  |:|..:|||:   .||.  :.|.|..   ||  |.......:.||    
  Rat     3 LLAYLKTQFVVHLLIGFVFVVSGLIINFTQLCT--LALWPISKNLYRRINCRLAYSLWSQLVMLL 65

  Fly    69 ----CRLVGITMEVRGLENVRKDHGAVVIMNHQSAVD-LC--VLAYLWPVIGRATVVSKKEVLYI 126
                |....:..:...:.:..|:| .|||:||...:| ||  .:...:.|:|.:.|::|:|:||:
  Rat    66 EWWSCTECTLFTDQATVNHFGKEH-VVVILNHNFEIDFLCGWTMCERFGVLGSSKVLAKRELLYV 129

  Fly   127 PFFGIGAWLWGTLYI---------DRSRKTDSINSLQKEAKAIQERNCKLLLFPEGTRNS----- 177
            |..|   |.|..|.|         ||....:.:..|....:.:.     .||:.||||.:     
  Rat   130 PLIG---WTWYFLEIVFCKRKWEEDRDTVIEGLRRLANYPEYMW-----FLLYCEGTRFTETKHR 186

  Fly   178 --------------KDSLLPFKKGSFHIALQ 194
                          |..|||..|| |..|:|
  Rat   187 VSMEVAASKGLPPLKYHLLPRTKG-FTTAVQ 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat2NP_609231.2 PlsC 47..261 CDD:439974 49/192 (26%)
Agpat3NP_001099848.1 PLN02380 12..325 CDD:178006 56/217 (26%)

Return to query results.
Submit another query.