DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat2 and Lpcat2b

DIOPT Version :10

Sequence 1:NP_609231.2 Gene:Agpat2 / 34176 FlyBaseID:FBgn0026718 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_001020802.1 Gene:Lpcat2b / 289439 RGDID:1310837 Length:517 Species:Rattus norvegicus


Alignment Length:248 Identity:60/248 - (24%)
Similarity:112/248 - (45%) Gaps:30/248 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LACVVALILSATAKAPYQMR----MFFIFFGAGLIVFLCVPFMILRP-RDYRNALF-PSWCFRQL 68
            |||.:.|   .|...|.::.    :|.:.:...|:..:.:|.....| :.:|..|. |.:.|  |
  Rat    52 LACSIFL---GTVLVPVRVSCIVFLFLLLWPVALLSTINLPIQPTEPVKSWRKHLIKPVFIF--L 111

  Fly    69 CRL----VGITMEVRGLENVRKDHGAVVIMNHQSAVDLCVLAYLWPVIGRATVVSKKEVLYIPFF 129
            .||    .|..::|:|.:..|::....|:..|.:..|...:.    |.|..:|||..:.:.||..
  Rat   112 LRLAFFCAGFLIKVKGKKATREEAPIFVVAPHSTFFDAIAVI----VAGLPSVVSDTQHVRIPLV 172

  Fly   130 GIGAWLWGTLYIDR----SRKTDSINSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFH 190
            |....|...:.:.|    |||| :.|.:....|: :.:..::|:||||...::..|:.||.|:|.
  Rat   173 GQCILLTQPVLVRREDPNSRKT-TRNEILSRVKS-KMKWPQILIFPEGLCTNRSCLVTFKLGAFS 235

  Fly   191 IALQGKSPVQPVVISKYSFMDDEKKTFRPGHALIHILPEVSTEKYKREDVQLL 243
            ..:    |||||::...:.:|....|:. |.:...:.....::.:.|.:|:.:
  Rat   236 PGV----PVQPVLLRYPNTLDTVTWTWH-GFSGFQVCMLTLSQPFTRMEVEFM 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat2NP_609231.2 PlsC 47..261 CDD:439974 51/207 (25%)
Lpcat2bNP_001020802.1 LPLAT_LPCAT1-like 113..324 CDD:153253 45/182 (25%)
HXXXXD motif 143..148 1/4 (25%)
FRQ1 374..488 CDD:444056
Blue background indicates that the domain is not in the aligned region.

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