DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Agpat2 and slc1

DIOPT Version :9

Sequence 1:NP_001162912.1 Gene:Agpat2 / 34176 FlyBaseID:FBgn0026718 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_594605.1 Gene:slc1 / 2542560 PomBaseID:SPAC1851.02 Length:279 Species:Schizosaccharomyces pombe


Alignment Length:208 Identity:71/208 - (34%)
Similarity:113/208 - (54%) Gaps:18/208 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 LVGITMEVRGLENVRKDHGAVVIMNHQSAVDLCVLAYLWPVIGRA-----TVVSKKEVLYIPFFG 130
            ::....::...|.:||...||:::||||.:|  :||     |||.     :|::||.:.|:|..|
pombe    82 ILDFRFKIENEEILRKHKSAVLVVNHQSELD--ILA-----IGRTFGPNYSVIAKKSLRYVPILG 139

  Fly   131 IGAWLWGTLYIDRSRKTDSINSLQKEAKAIQERNCKLLLFPEGTR--NSKDSLLPFKKGSFHIAL 193
            ....|...::|||||::|:|....|.|:.:::.|..:.:|.||||  :.|..|||.|||:||:|:
pombe   140 WFMILSDVVFIDRSRRSDAIQLFAKAARRMRKENISIWVFAEGTRSYSLKPCLLPLKKGAFHLAV 204

  Fly   194 QGKSPVQPVVISKYSFM-DDEKKTFRPGHALIHILPEVSTEKYKREDVQLLIDECQSIMQTEYTK 257
            |.:.|:.|:.|..|..: ....|.|..|.|||.:|..:.||....|||..|:.|.::.|.....:
pombe   205 QAQVPIIPIAIQTYGHLFHPPTKVFNKGEALIKVLDPIPTEGKTAEDVNDLLHETETAMNNALVE 269

  Fly   258 LSKEGQALSSKKQ 270
            :...|:.   |||
pombe   270 IDDYGKV---KKQ 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat2NP_001162912.1 LPLAT_AGPAT-like 65..248 CDD:153251 66/184 (36%)
slc1NP_594605.1 PlsC 36..278 CDD:223282 68/205 (33%)
LPLAT_AGPAT-like 85..260 CDD:153251 66/181 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 89 1.000 Domainoid score I2093
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 136 1.000 Inparanoid score I1394
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001236
OrthoInspector 1 1.000 - - otm47376
orthoMCL 1 0.900 - - OOG6_100535
Panther 1 1.100 - - O PTHR10434
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X864
TreeFam 1 0.960 - -
1110.820

Return to query results.
Submit another query.