DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Agpat2 and GPAT4

DIOPT Version :10

Sequence 1:NP_609231.2 Gene:Agpat2 / 34176 FlyBaseID:FBgn0026718 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_848934.1 Gene:GPAT4 / 137964 HGNCID:20880 Length:456 Species:Homo sapiens


Alignment Length:213 Identity:50/213 - (23%)
Similarity:85/213 - (39%) Gaps:60/213 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 IFFGAGLIVFLC--VPFMIL----------------------RPRDYRNALFPSWCFRQLCRLVG 73
            :.:|.|:::..|  :|..|.                      |.:::.:......|:|...|.:.
Human   162 VLWGLGVLIRYCFLLPLRIALAFTGISLLVVGTTVVGYLPNGRFKEFMSKHVHLMCYRICVRALT 226

  Fly    74 ITMEVRGLENVRKDHGAVVIMNHQSAVDLCVLAY-------------LWPVIGRATVVSKKEVLY 125
            ..:.....|| |..:|.:.:.||.|.:|:.:||.             |..||.||.|.:...|  
Human   227 AIITYHDREN-RPRNGGICVANHTSPIDVIILASDGYYAMVGQVHGGLMGVIQRAMVKACPHV-- 288

  Fly   126 IPFFGIGAWLWGTLYIDRSRKTDSINSLQKEAKAIQERN-CKLLLFPEGTRNSKDSLLPFKKGSF 189
                          :.:||...|.....::..:.:|::: ..:|:|||||..:..|::.||||||
Human   289 --------------WFERSEVKDRHLVAKRLTEHVQDKSKLPILIFPEGTCINNTSVMMFKKGSF 339

  Fly   190 HIALQGKSPVQPVVISKY 207
            .|.    :.|.||.| ||
Human   340 EIG----ATVYPVAI-KY 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat2NP_609231.2 PlsC 47..261 CDD:439974 46/197 (23%)
GPAT4NP_848934.1 LPLAT_LPCAT1-like 218..427 CDD:153253 43/157 (27%)
HXXXXD motif. /evidence=ECO:0000250|UniProtKB:Q9D517 248..253 2/4 (50%)

Return to query results.
Submit another query.