DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat2 and Lpcat2

DIOPT Version :9

Sequence 1:NP_001162912.1 Gene:Agpat2 / 34176 FlyBaseID:FBgn0026718 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_001258273.1 Gene:Lpcat2 / 100359680 RGDID:2325051 Length:544 Species:Rattus norvegicus


Alignment Length:261 Identity:64/261 - (24%)
Similarity:115/261 - (44%) Gaps:54/261 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 GLIVFLCVPFMILR----PR-------DYRNALF-PSWCF--RQLCRLVGITMEVRGLENVRKDH 88
            ||::.|..||.::.    |:       |:|..:. |:..|  |.:...:|..:.|:|......:.
  Rat    74 GLVLLLAWPFAVISTVCCPKKLTHPISDWRRKITQPALKFLGRAMFFSMGFRVTVKGKVASPLEA 138

  Fly    89 GAVVIMNHQSAVD--LCVLAYLWPVIGRATVVSKKEVLYIPFFG-IGAWLWGTLY--IDRSRKTD 148
            ...|:..|.:..|  .||:|      |..::||:.|....|..| :...|...|.  :|...:.:
  Rat   139 PIFVVAPHSTFFDGIACVVA------GLPSLVSRNENAQTPLVGRLLRALQPVLVSRVDPDSRKN 197

  Fly   149 SINSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFHIALQGKSPVQPVVISKYSFMDDE 213
            :||.::|.|.:..|.. ::|:|||||..::..|:.||.|:|   :.| .|||||::...:.:|..
  Rat   198 TINEIKKRAMSGGEWP-QILVFPEGTCTNRSCLITFKPGAF---IPG-VPVQPVLLRYPNKLDTV 257

  Fly   214 KKTFRPGHALIHI----------------LPEVSTEKYKRED-------VQLLIDECQSIMQTEY 255
            ..|:: |:..|.:                :|..:..:.:|.|       |:.|:.|...|..|::
  Rat   258 TWTWQ-GYTFIQLCVLTFCQLFTKVEVEFMPVQAPSEEERNDPVLFASRVRNLMAEALEIPVTDH 321

  Fly   256 T 256
            |
  Rat   322 T 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat2NP_001162912.1 LPLAT_AGPAT-like 65..248 CDD:153251 52/212 (25%)
Lpcat2NP_001258273.1 PlsC 103..>254 CDD:223282 44/161 (27%)
LPLAT_LPCAT1-like 116..327 CDD:153253 54/219 (25%)
HXXXXD motif. /evidence=ECO:0000250|UniProtKB:Q3TFD2 146..151 1/4 (25%)
EGTC motif 220..223 2/2 (100%)
EFh 396..458 CDD:238008
EF-hand_7 396..457 CDD:290234
EF-hand_7 433..489 CDD:290234
EFh 433..486 CDD:238008
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 520..544
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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