DRSC/TRiP Functional Genomics Resources

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Protein Alignment D12 and Yeats2

DIOPT Version :9

Sequence 1:NP_609228.2 Gene:D12 / 34172 FlyBaseID:FBgn0027490 Length:969 Species:Drosophila melanogaster
Sequence 2:NP_001102527.1 Gene:Yeats2 / 498112 RGDID:1566176 Length:1405 Species:Rattus norvegicus


Alignment Length:1504 Identity:272/1504 - (18%)
Similarity:437/1504 - (29%) Gaps:677/1504 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DPDYQQTEVSSQDEEETCAEAESPGQRKWTKTEQSDGMLPLSDKFQRIRELLRLEFQREISQKVE 83
            ||||:...|:...:.....|:.:           .|..:      |:|..:::.:|..|:..|..
  Rat    12 DPDYEDVSVALPSKRHKAIESSA-----------RDAAV------QKIETIIKEQFALEMKNKEH 59

  Fly    84 QLAEIDRRLLQGRQLLDRLRYQVVSEYYRKQQVPLTGADIAKV-RGDSLFGDDIAAPQLPLHPAI 147
            ::..||:||::.|:::|:||..:|:.||       ..|.:.|| .|...|.     |....||||
  Rat    60 EIDVIDQRLIEARRMMDKLRACIVANYY-------ASAGLLKVSEGLKTFD-----PMAFNHPAI 112

  Fly   148 KKIVGKRPVVIQNHLPERTAATLAKETIRLRNPAHRRAERRRQQKIKEQGIVTDHSKDKKDQPEQ 212
            ||.:         ..|.|::           :|.::|:|...... .|...::.|:....|:...
  Rat   113 KKFL---------ESPSRSS-----------SPTNQRSETPSANH-SESDSLSQHNDFLSDKDNN 156

  Fly   213 EPPISVKLEDEQPCTSRQAHERQVELNASRLNNKN-------------------KFNFVVGNTSK 258
            .   :|.:|:.......|...|....:.|.::..:                   |...||||.||
  Rat   157 S---NVDVEERLSSIGEQRLSRNTGRDTSSISGSHKRELRSADLAGDETSRLFVKKTIVVGNVSK 218

  Fly   259 YIGEDSRENGTGGNALTYKWLVYVQGKDLPEPLEKYIKKVRFHLHPSYRPNDIVDVHRSPFQLNR 323
            ||..|.||.   .:..|:||:|||:|......:..::|||.|.|||||:|||:|:|...||.|.|
  Rat   219 YIPPDKREE---NDQSTHKWMVYVRGSRREPSINHFVKKVWFFLHPSYKPNDLVEVREPPFHLTR 280

  Fly   324 HGWGEFPMRIQLFFQEHLQQKPVQLMHTVVLDKTMCGLHTMGAETTVEIWLRA---------KQA 379
            .||||||:|:|:.|::. |.|.:.::|.:.||:|..||.|:||||.|::.|..         .|:
  Rat   281 RGWGEFPVRVQVHFKDS-QNKRIDIIHNLKLDRTYTGLQTLGAETVVDVELHRHSLGEDYVYPQS 344

  Fly   380 ITKQKSGKPHPPHEQETAVPAPPLAAP--NVLEPSVFAFPGESCKPRTISITQNKEELDDNLFAG 442
            .....|..|.|    ...:|||..|:|  ...||:..|..||.....|      :.|....|:: 
  Rat   345 SESDISDAPPP----SLTIPAPVKASPVARSPEPASAAPVGEGFPDST------EAERHSTLYS- 398

  Fly   443 INKIELSDDIEKIEPTVLVSEPLKLNYS-----------------PRKQPPTPSSP--------- 481
                 |...:|:....|..::  |:.:|                 |:.|.|.|.||         
  Rat   399 -----LPSSLERTPTKVTAAQ--KVTFSSHGNSAFQPIASSCKIVPQSQVPNPESPGKSFQPITM 456

  Fly   482 ------------------PRT------QLRLNAAQVTASKPSVVY-------------------- 502
                              |||      .|:..:|....|.|..:.                    
  Rat   457 SCKIVSGSPISTPSPSPLPRTPTSTPVHLKQGSASAGISNPHAIVDKPGQATGASAPSAGSPTSK 521

  Fly   503 LPVNGR------SP--------------RQE--------------SLPERQ-------------- 519
            |||..:      ||              :||              |.|:.|              
  Rat   522 LPVASQASQGTGSPVPKIHGSSFLTSTVKQEDSLFASMPPLCPIGSHPKVQSPKAVTGGLGAFTK 586

  Fly   520 ---RQE--------------------FSPVK--HYPPASPQR---AWKESSSDRPPIKP-----V 551
               :||                    :..||  |....|||:   :..|..:..|.|.|     |
  Rat   587 VIIKQEPGETPHVSTTGAANQSAFPQYVTVKGGHMIAVSPQKQVLSAGEGITQSPKIPPSKVVGV 651

  Fly   552 PNG----------------------------HHQGKKNVVFQRA--------------------- 567
            |.|                            ...|.|.||.|..                     
  Rat   652 PVGSALPSTVKQAVAISSGQILVAKASSSITKAVGPKQVVTQGVAKAIVSGGGGTIVAQPVQTLT 716

  Fly   568 -----------------------------------------------------GKLYIID----- 574
                                                                 |||.:|.     
  Rat   717 KTQVTAAGPPKTGSQGSVMATLQLPATNLANLANLPPGTKLYLTTNSKNPSGKGKLLLIPQGAIL 781

  Fly   575 ----------------------------------------------------------------- 574
                                                                             
  Rat   782 RATNNANLQSGSAAAGGSGGSCGAGGGGGGGGGAGGAPSTSGPGGGPQHLTYTSYILKQTPQGTF 846

  Fly   575 -------------------------------PLQRKLK-----------QAAK--QQSLLK---- 591
                                           |.|:.||           |||.  |.||||    
  Rat   847 LVGQPSPQTPGKQLTTASVVQGTLGVSTSSAPGQQTLKVISGQKTTLFTQAATAGQASLLKLPDN 911

  Fly   592 --------PQL---------------------------------------------SLLKPPSE- 602
                    |||                                             |::|.|.: 
  Rat   912 TLKSVPAAPQLAKPGTTMLRVAGGVITAAPSPAVAFSANGAVHQAEGSAPVSSSVGSIIKTPGQP 976

  Fly   603 --------------------TRWHMLQCMQHDHGYANMSGEME---------------------- 625
                                |...::.......|.|.:||.::                      
  Rat   977 QVCVSQATMATCKATAPAAVTAASLVSAPSSISGKATVSGLLKIHSGQCSPQQAVLTIPSQLKPL 1041

  Fly   626 -------------------------EKPMLLP------------PIVDTTIQSRPRR-------- 645
                                     :.|.:||            |:....:::.|..        
  Rat  1042 SINTSGGVQTVLMPVNKVVQSFSTSKLPTVLPISVPNPAAPSPAPVTIAKVKTEPETPGPNCVSQ 1106

  Fly   646 --------------LEHIFRSAQFRNMRSAVEFLLSRLPLASIDQQKEYPFTCITLEEFHNHTAL 696
                          ..::.:......::..:..::.::||.:........|:..:||:::.....
  Rat  1107 ETQIAVKTEESSELSNYVIQVDHLETIQQLLTAVVKKIPLITAKGNDTSCFSAKSLEQYYGWNIG 1171

  Fly   697 KQRCFEYLRARMLRRCLMQ----HHELHKLDISGKEHYWSLREIVAFARVHGYTPALKDVLPVVH 757
            |:|..|:.||..:|:.|.:    :...|.|.....:|      |..:.|.|||||      |...
  Rat  1172 KRRAAEWQRAMTVRKVLQEILERNPRFHHLTALKTKH------IAHWCRCHGYTP------PDPE 1224

  Fly   758 EKRKQKLSDEEQLARRVQAQLKGEPQPQLSAYSSLSSGNRLEAWITKQSDRLLGHDQQMRDKEFI 822
            ..|....|.|:     |..|:..||:    ..||.|:.:.|   ..|..|......::..::|.:
  Rat  1225 SLRHNGDSIED-----VLTQIDSEPE----CLSSFSTADDL---CRKLEDLQQFQKREPENEEEV 1277

  Fly   823 DVLGVDKPHPLASRLTNSADVSFQMVNHRQLLYLPPPKHLDSTLQLVQEMCKDINITLEPEESPP 887
            |:|.:.:|      |..:.....:........||||.....    .|.::.:.|.|||:|.....
  Rat  1278 DILSLSEP------LKTNIKKEQEEKQEEMRFYLPPTPGSG----FVGDITQKIGITLQPVALHR 1332

  Fly   888 GVSQPLALSMLGQVLRTFIEKLVRRSLAAKLQQETLEQLPPAAANAPLCLQPQDIGRVISLCSEL 952
            .:...:...|:.:.....:..::|::||...|..:..::|..       :...:|.:.|.....|
  Rat  1333 NMYASVVEDMILKATEQLVSDILRQALAVGYQTASPNRIPKE-------ITVSNIHQAICNIPFL 1390

  Fly   953 DFLGNSHLG 961
            |||.|.|:|
  Rat  1391 DFLTNKHMG 1399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D12NP_609228.2 YEATS 275..357 CDD:281374 39/81 (48%)
Yeats2NP_001102527.1 YEATS_YEATS2_like 209..332 CDD:341126 60/126 (48%)
PHA03247 <342..653 CDD:223021 58/328 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343057
Domainoid 1 1.000 94 1.000 Domainoid score I7309
eggNOG 1 0.900 - - E1_COG5033
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 209 1.000 Inparanoid score I3606
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1482359at2759
OrthoFinder 1 1.000 - - FOG0009207
OrthoInspector 1 1.000 - - oto98711
orthoMCL 1 0.900 - - OOG6_106758
Panther 1 1.100 - - LDO PTHR23195
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6947
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.760

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