DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment D12 and yeats2

DIOPT Version :9

Sequence 1:NP_609228.2 Gene:D12 / 34172 FlyBaseID:FBgn0027490 Length:969 Species:Drosophila melanogaster
Sequence 2:XP_012825478.1 Gene:yeats2 / 100135359 XenbaseID:XB-GENE-5865259 Length:1238 Species:Xenopus tropicalis


Alignment Length:1352 Identity:262/1352 - (19%)
Similarity:444/1352 - (32%) Gaps:517/1352 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RRHSEYHDPDYQQTEVSSQDEEETCAEAESPGQRKWTKTEQSDGMLPLSDKFQRIRELLRLEFQR 76
            :|.||..||||:...|..|::....||           |...|..:      .:|..:::.:|..
 Frog     5 KRSSEDKDPDYEDISVVHQNKRHKAAE-----------TTARDATI------LKIESIIKEQFVT 52

  Fly    77 EISQKVEQLAEIDRRLLQGRQLLDRLRYQVVSEYY-----RKQQVPLTGADIAKVRGDSLFGDDI 136
            |:..|..::..||:||.:.|:::|:||..:|:.||     .|.|           .|.|.:...:
 Frog    53 ELKNKEHEVEVIDQRLNEARRMMDKLRACIVANYYASAALNKNQ-----------EGPSSYDATV 106

  Fly   137 AAPQLPLHPAIKKIVGKRPVVIQNHLPERTAATLAKETIRLRNPAHRRAERRRQQKIKEQGIVTD 201
            ..     ||:|||.:         ..|.|.:           :||::|:|.......:...:.| 
 Frog   107 LN-----HPSIKKFL---------ESPSRAS-----------SPANQRSETPSVANSETDSVYT- 145

  Fly   202 HSKDKKDQPEQEPPISVK-LEDE-----QPCTSRQAHERQVELNASRLNNKNKFNFVVGNTSKYI 260
            |::||....:.:.|.:.| |..|     .|..:... ||||...........|...||||.||||
 Frog   146 HNEDKDGSLDAKGPAANKALRPEGNTVKDPSINENT-ERQVSRTEDGPRRFVKKTIVVGNVSKYI 209

  Fly   261 GEDSRENGTGGNALTYKWLVYVQGKDLPEPLEKYIKKVRFHLHPSYRPNDIVDVHRSPFQLNRHG 325
            ..|.||.   .:..|:||:|||:|......::.::|||.|.|||||:|||:|:|...||.|.|.|
 Frog   210 PPDKREE---NDQSTHKWMVYVRGSRKEPSIDHFVKKVWFFLHPSYKPNDLVEVSEPPFHLTRRG 271

  Fly   326 WGEFPMRIQLFFQEHLQQKPVQLMHTVVLDKTMCGLHTMGAETTVEI----------WLRAKQA- 379
            |||||:|:|:.|::. |.|.:.::|.:.||:|..||.|:||||.||:          :|.::.: 
 Frog   272 WGEFPVRVQIHFKDS-QNKRIDIIHNLKLDRTYTGLQTLGAETVVEVEIYRHSLGEDFLGSQSSN 335

  Fly   380 ---------ITKQKSGKPHP-PHE----QETAVPAP-------------------------PLAA 405
                     ::..||..||. .||    :.:..|.|                         |:.|
 Frog   336 ECAQSEASLLSHVKSSSPHKVAHESADKEPSYYPQPSSLERTPTKVAQRLSFGIPGSTAFQPITA 400

  Fly   406 PNVLEP-----SVFAFPGESCKPRTI-----------------------------------SITQ 430
            ...:.|     |:...||:|.:|.|:                                   |.|.
 Frog   401 SCKIVPQGQAASLAESPGKSFQPITMSCKIVSGTGSPTSKHSSTSQGASGTKSPVPKLHGTSFTP 465

  Fly   431 NKEELDDNLFAG-----------------------------INKIELSDDIEKIEPTVLVSEP-- 464
            ...:.:|::||.                             |.|.|.::..::::.....|:|  
 Frog   466 QNIKQEDSMFAAMPPLCPIGSQPKAQSPKTVTGGLGAFTKVIIKQEPTEPTQQLQEAPSTSQPPL 530

  Fly   465 -----LKLNY----SPRKQPPT--------------------PS--------------------- 479
                 :|.|:    ||:|...|                    ||                     
 Frog   531 QQIVTVKGNHMVAVSPQKNLATSEGSKVVGIPVGTTVQAAIKPSVTISGGQILVAKSSSSIAKAV 595

  Fly   480 ----------------------------SPPRTQLRLNAAQVTASKPSV---------------- 500
                                        |..:.|:....||...|:.||                
 Frog   596 GSKQIVAQGVAKAVVSSGSGNVVAQSSQSVSKAQVTSAVAQKAGSQGSVMATLQLPASNIPNLAN 660

  Fly   501 ------VYLPVNGRSP-------------------------------------RQESLPERQRQE 522
                  :||..|.::|                                     ....||:.....
 Frog   661 LPPGTKLYLTTNSKNPSGKGKLLLIPQGAILRAANTASLQSGASSSGGSSTASTTSGLPQHLTYT 725

  Fly   523 FSPVKHYPPA-------SPQRAWKESSSD---RPPIKPVPNGHH--------------------- 556
            ...:|..|..       |.|.:.|:::::   :..:.....||.                     
 Frog   726 SYILKQTPQGTFLVGQQSQQASGKQAAANVIVQGNVATSAQGHQTLKLTTGPKGTLVAQTHSASA 790

  Fly   557 ---------------QGKK-------------------------NVVFQRAGKLYIIDPLQRKLK 581
                           |.:|                         ||..|:|..:......|....
 Frog   791 AVAKISDGAVTSVQSQTQKPGTTLLRVAGGVITASSASLPSVSTNVSTQQAADVSSTSTTQVSAS 855

  Fly   582 QAAKQQSLLK-----PQLSLLKPP------SETRWHMLQCMQHDHGYANM--------------- 620
            ..:..|.::.     ..|..:||.      |.||...............|               
 Frog   856 NKSISQQVMARIAHVKSLGTVKPATSAAAVSSTRTAPTLAQSSAASAVKMEPDMTSNASSTSGPG 920

  Fly   621 ---------SGEMEEKPMLLPPIVD-TTIQSRPRRLEHIFRSAQFRNMRSAVEFLLSRLPLASID 675
                     |||.:...:.:...|: .::::|....||:      :|.:..:..::.::||.:..
 Frog   921 SSTPVKTEESGESDPSSVRVVGQVECASLRARHNWTEHL------QNFKQLLTAIVKKVPLLAEK 979

  Fly   676 QQKEYPFTCITLEEFHNHTALKQRCFEYLRARMLRRCLMQHHELHKLDISGKEHYWS------LR 734
            .:....|...::|::::....|:|..|:.||..:::.|.        :|..|:..:|      .:
 Frog   980 SEDGNAFCATSVEQYYSWNIGKRRASEWQRAVTMKKMLQ--------EIIEKQPKFSNVAPLKTK 1036

  Fly   735 EIVAFARVHGYTPALKDVLPVVHEKRKQKLSDEEQLAR-RVQAQLKGEPQPQLSAYSSL-SSGNR 797
            :||.:.|:|||||      |........|.|.|:.||| ..:|.|    |...||...| .....
 Frog  1037 QIVHWCRIHGYTP------PDPESLGSDKESIEDVLARIDNEAAL----QTSFSAPDILCQKMEE 1091

  Fly   798 LEAWITKQSDRLLGHDQQMRDKEFIDVLGVDKPHPLASRLTNSA--DVSFQMVNHRQLLYLPPPK 860
            ||....|:::         .|.: :|||..::...|..:..:.|  |....||.           
 Frog  1092 LEKTFKKETE---------EDVD-VDVLSANEEQRLHIKKESEAEEDAKLYMVT----------- 1135

  Fly   861 HLDSTLQLVQEMCKDINITLEPEESPPGVSQPLALSMLGQVLRTFIEKLVRRSLAAKLQ------ 919
              ....:.:::..::|.::::|.|....:.......|:.:....|:..::|.:|....|      
 Frog  1136 --SPACEFIRDKAQEIGVSVQPVEVQDNIYTSAVEEMILKATEQFVSDVLRDALGVAYQMTSHNR 1198

  Fly   920 --QE-TLEQLPPAAANAPLCLQPQDIGRVISLCSELDFLGNSHLGVAPIEPQ 968
              || |:..:..|..|.|:                .|||.|.|:..:..|.:
 Frog  1199 APQEITVSNIHQAICNIPM----------------FDFLTNKHMASSTTEDE 1234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D12NP_609228.2 YEATS 275..357 CDD:281374 39/81 (48%)
yeats2XP_012825478.1 YEATS 221..300 CDD:281374 37/79 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 94 1.000 Domainoid score I7385
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 213 1.000 Inparanoid score I3547
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1482359at2759
OrthoFinder 1 1.000 - - FOG0009207
OrthoInspector 1 1.000 - - oto105408
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6947
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

Return to query results.
Submit another query.