DRSC/TRiP Functional Genomics Resources

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Protein Alignment grk and nrg1

DIOPT Version :9

Sequence 1:NP_476568.2 Gene:grk / 34171 FlyBaseID:FBgn0001137 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001264015.1 Gene:nrg1 / 796461 ZFINID:ZDB-GENE-050302-113 Length:730 Species:Danio rerio


Alignment Length:133 Identity:32/133 - (24%)
Similarity:59/133 - (44%) Gaps:23/133 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 STPDSTTPSPNDKETEIQMLPCSEAYNTSFCLNGGHCFQHPMVNNTVFHSCLCVNDYDGERCA-- 224
            :|..|||||   .:|...:.||:|: ...:|:|.|.||...:....:...|.|.|::.|:||.  
Zfish   257 NTATSTTPS---AKTSSHVTPCNES-EKEYCVNHGKCFTLEVTPGNIRRLCRCPNEFTGDRCQHY 317

  Fly   225 -----YKSWNGDYIYSPPTAQRKVRMAHIVFSFPVLLMLSSLYVLFAAVFMLRNVPDYRRKQQQL 284
                 ||....:::.:....|::|            |.::.:.:....|.::..|...:.|:|:.
Zfish   318 VMASFYKHLGIEFMEAEELYQKRV------------LTITGICIALLVVGIMCVVAYCKTKKQRK 370

  Fly   285 HLH 287
            .||
Zfish   371 KLH 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grkNP_476568.2 None
nrg1NP_001264015.1 I-set 166..255 CDD:254352
Ig 178..253 CDD:299845
PHA03099 257..372 CDD:165381 30/130 (23%)
Neuregulin 333..718 CDD:280343 9/53 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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