DRSC/TRiP Functional Genomics Resources

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Protein Alignment grk and vn

DIOPT Version :10

Sequence 1:NP_476568.2 Gene:grk / 34171 FlyBaseID:FBgn0001137 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_523942.2 Gene:vn / 38657 FlyBaseID:FBgn0003984 Length:623 Species:Drosophila melanogaster


Alignment Length:78 Identity:21/78 - (26%)
Similarity:27/78 - (34%) Gaps:26/78 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 PNDKETEIQMLPCSEAYNTSFCLNGGHCFQHPMVNNTVFHSCLCVNDYDGERCAYKSW------- 228
            |.|:..  ..:||    |..:|.:.|.|...|.:|...   |.|..:|.|.||..| |       
  Fly   556 PTDRSA--SGIPC----NFDYCFHNGTCRMIPDINEVY---CRCPTEYFGNRCENK-WPDSRYFV 610

  Fly   229 ---------NGDY 232
                     |.||
  Fly   611 AIYGQIHTLNNDY 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grkNP_476568.2 None
vnNP_523942.2 Ig 462..540 CDD:472250
Ig strand B 474..478 CDD:409353
Ig strand C 487..491 CDD:409353
Ig strand E 513..517 CDD:409353
Ig strand F 528..533 CDD:409353
EGF 566..598 CDD:394967 11/38 (29%)
Blue background indicates that the domain is not in the aligned region.

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