DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment grk and Nrg1

DIOPT Version :10

Sequence 1:NP_476568.2 Gene:grk / 34171 FlyBaseID:FBgn0001137 Length:295 Species:Drosophila melanogaster
Sequence 2:XP_006509122.1 Gene:Nrg1 / 211323 MGIID:96083 Length:884 Species:Mus musculus


Alignment Length:181 Identity:45/181 - (24%)
Similarity:76/181 - (41%) Gaps:25/181 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 NRLELQRKQLEASAQEE--ADQLHPDTDPNPDSGGQLPNADDSIAADPEQDGIILGSSTD--TWL 128
            |.|..:.|......|::  ..:|..:.....|||..:......:..|.....|.:..|.|  |.:
Mouse   288 NELNRRNKPQNVKIQKKPGKSELRINKASLADSGEYMCKVISKLGNDSASANITIVESNDLTTGM 352

  Fly   129 ASESSTPITDSETVTTPETVTHTGEPPPDPSSSSTPDSTTPSPNDKETEIQMLPCSEAYNTSFCL 193
            ::.:..|...||:.......|....     :||||..|||.:.:       ::.|:|...| ||:
Mouse   353 SASTERPYVSSESPIRISVSTEGAN-----TSSSTSTSTTGTSH-------LIKCAEKEKT-FCV 404

  Fly   194 NGGHCFQHPMVNNTVFHSCLCVNDYDGERCAYKSWNGDYIYSP--PTAQRK 242
            |||.||....::|...:.|.|.|::.|:||.      :|:.:.  .|::||
Mouse   405 NGGECFMVKDLSNPSRYLCKCPNEFTGDRCQ------NYVMASFYMTSRRK 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grkNP_476568.2 None
Nrg1XP_006509122.1 Ig_Pro_neuregulin-1 250..342 CDD:409476 10/53 (19%)
putative Ig strand A 250..256 CDD:409476
Ig strand B 264..272 CDD:409476
Ig strand C 279..284 CDD:409476
putative Ig strand D 298..303 CDD:409476 0/4 (0%)
Ig strand E 308..312 CDD:409476 1/3 (33%)
Ig strand F 322..327 CDD:409476 0/4 (0%)
Ig strand G 334..342 CDD:409476 2/7 (29%)
EGF 403..433 CDD:394967 11/29 (38%)
Neuregulin 511..866 CDD:426627
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.