DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment IDH1 and idh1

DIOPT Version :10

Sequence 1:NP_005887.2 Gene:IDH1 / 3417 HGNCID:5382 Length:414 Species:Homo sapiens
Sequence 2:XP_012825747.1 Gene:idh1 / 448164 XenbaseID:XB-GENE-1004994 Length:415 Species:Xenopus tropicalis


Alignment Length:410 Identity:363/410 - (88%)
Similarity:389/410 - (94%) Gaps:0/410 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSKKISGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDAAEAIK 65
            |||||:||||||||||||||:||:|||||||.||||||||.|||||||||||:||||.|||||||
 Frog     1 MSKKINGGSVVEMQGDEMTRVIWDLIKEKLILPYVELDLHCYDLGIENRDATDDQVTVDAAEAIK 65

Human    66 KHNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIII 130
            |:|||:|||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
 Frog    66 KYNVGIKCATITPDEKRVEEFNLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIII 130

Human   131 GRHAYGDQYRATDFVVPGPGKVEITYTPSDGTQKVTYLVHNFEEGGGVAMGMYNQDKSIEDFAHS 195
            ||||||||||||||||||||||||::||.||.:.:.|::||||:.||||:||||.|:||.|||||
 Frog   131 GRHAYGDQYRATDFVVPGPGKVEISFTPKDGGEAIKYVIHNFEDCGGVALGMYNTDQSIRDFAHS 195

Human   196 SFQMALSKGWPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSQFEAQKIWYEHRLIDDMVAQAMK 260
            ||||||||.||||:||||||||||||||||||||||:|.||||||.:||||||||||||||||||
 Frog   196 SFQMALSKSWPLYMSTKNTILKKYDGRFKDIFQEIYEKDYKSQFEEKKIWYEHRLIDDMVAQAMK 260

Human   261 SEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLVCPDGKTVEAEAAHGTVTRHYRMYQKGQET 325
            |||||||||||||||||||||||||||||||||||:||||||||||||||||||||||:||||||
 Frog   261 SEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLICPDGKTVEAEAAHGTVTRHYRMHQKGQET 325

Human   326 STNPIASIFAWTRGLAHRAKLDNNKELAFFANALEEVSIETIEAGFMTKDLAACIKGLPNVQRSD 390
            |||||||||||||||.||||||||:||..||..||||.:||||||||||||||||||||||||:|
 Frog   326 STNPIASIFAWTRGLDHRAKLDNNQELKNFATTLEEVCVETIEAGFMTKDLAACIKGLPNVQRAD 390

Human   391 YLNTFEFMDKLGENLKIKLA 410
            ||:||||||||.|||::|||
 Frog   391 YLSTFEFMDKLAENLQLKLA 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IDH1NP_005887.2 PTZ00435 1..411 CDD:240417 363/410 (89%)
idh1XP_012825747.1 PTZ00435 1..411 CDD:240417 363/410 (89%)

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