DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment IDH1 and idp1

DIOPT Version :10

Sequence 1:NP_005887.2 Gene:IDH1 / 3417 HGNCID:5382 Length:414 Species:Homo sapiens
Sequence 2:NP_594105.2 Gene:idp1 / 2542598 PomBaseID:SPAC6G10.08 Length:439 Species:Schizosaccharomyces pombe


Alignment Length:401 Identity:262/401 - (65%)
Similarity:314/401 - (78%) Gaps:7/401 - (1%)


- Green bases have known domain annotations that are detailed below.


Human    10 VVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKHNVGVKCA 74
            ||||.||||||:||::|:|||:.||:::.|..||||||.||.||||:|.|||:||.|::||:|||
pombe    41 VVEMDGDEMTRVIWKIIREKLVLPYMDIKLDYYDLGIEARDKTNDQITVDAAKAILKNDVGIKCA 105

Human    75 TITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQY 139
            ||||||.||:|:.||:|||||||||||||.||||||.|:.||||:.:.||..||.|||||:||||
pombe   106 TITPDEARVKEYNLKKMWKSPNGTIRNILNGTVFREPILIKNIPKYIPGWTNPICIGRHAFGDQY 170

Human   140 RATDFVVPGPGKVEITYTP-SDGTQKVTYLVHNFEEGGGVAMGMYNQDKSIEDFAHSSFQMALSK 203
            ::||.|..||||:|:::|| .:.:.|.||.|:.| .|.||||.|||.|.||..||||||||||.|
pombe   171 KSTDLVASGPGKLELSFTPKGNPSAKETYNVYEF-NGSGVAMSMYNTDDSIRGFAHSSFQMALQK 234

Human   204 GWPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSQFEAQKIWYEHRLIDDMVAQAMKSEGGFIWA 268
            ..||||||||||||||||||||.|||:|:..||.:||...:||:|||||||||||:||.|||:||
pombe   235 KMPLYLSTKNTILKKYDGRFKDTFQEVYESDYKQKFEELGLWYQHRLIDDMVAQAIKSNGGFVWA 299

Human   269 CKNYDGDVQSDSVAQGYGSLGMMTSVLVCPDGKTVEAEAAHGTVTRHYRMYQKGQETSTNPIASI 333
            ||||||||.||.|||.|||||:|||||:.|:|:|.|:|||||||.|||..|.||::||||.||||
pombe   300 CKNYDGDVMSDVVAQAYGSLGLMTSVLIHPNGRTFESEAAHGTVQRHYMQYLKGKKTSTNSIASI 364

Human   334 FAWTRGLAHRAKLDNNKELAFFANALEEVSIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFM 398
            ||||||||||.:||.|:.|..||||||...:..:|.|.|||||....|. ||    .|::||||:
pombe   365 FAWTRGLAHRGRLDGNERLVKFANALEHACVRCVEKGIMTKDLYLLSKS-PN----GYVDTFEFL 424

Human   399 DKLGENLKIKL 409
            |.:...|..:|
pombe   425 DAVKSELDSEL 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IDH1NP_005887.2 PTZ00435 1..411 CDD:240417 262/401 (65%)
idp1NP_594105.2 PTZ00435 31..435 CDD:240417 261/399 (65%)

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