DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment IDH1 and Idh1

DIOPT Version :10

Sequence 1:NP_005887.2 Gene:IDH1 / 3417 HGNCID:5382 Length:414 Species:Homo sapiens
Sequence 2:NP_113698.1 Gene:Idh1 / 24479 RGDID:2862 Length:414 Species:Rattus norvegicus


Alignment Length:414 Identity:399/414 - (96%)
Similarity:408/414 - (98%) Gaps:0/414 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSKKISGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDAAEAIK 65
            ||:||.|||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||
  Rat     1 MSRKIHGGSVVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIK 65

Human    66 KHNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIII 130
            |:||||||||||||||||||||||||||||||||||||||||||||||||||||||:||||||||
  Rat    66 KYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIII 130

Human   131 GRHAYGDQYRATDFVVPGPGKVEITYTPSDGTQKVTYLVHNFEEGGGVAMGMYNQDKSIEDFAHS 195
            ||||||||||||||||||||||||||||.||:||||||||:||||||||||||||||||||||||
  Rat   131 GRHAYGDQYRATDFVVPGPGKVEITYTPKDGSQKVTYLVHDFEEGGGVAMGMYNQDKSIEDFAHS 195

Human   196 SFQMALSKGWPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSQFEAQKIWYEHRLIDDMVAQAMK 260
            ||||||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||||
  Rat   196 SFQMALSKGWPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSKFEAQKIWYEHRLIDDMVAQAMK 260

Human   261 SEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLVCPDGKTVEAEAAHGTVTRHYRMYQKGQET 325
            |||||||||||||||||||||||||||||||||||:|||||||||||||||||||||||||||||
  Rat   261 SEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLICPDGKTVEAEAAHGTVTRHYRMYQKGQET 325

Human   326 STNPIASIFAWTRGLAHRAKLDNNKELAFFANALEEVSIETIEAGFMTKDLAACIKGLPNVQRSD 390
            |||||||||||:||||||||||||.||:|||||||||.|||||||||||||||||||||||||||
  Rat   326 STNPIASIFAWSRGLAHRAKLDNNTELSFFANALEEVCIETIEAGFMTKDLAACIKGLPNVQRSD 390

Human   391 YLNTFEFMDKLGENLKIKLAQAKL 414
            ||||||||||||||||.|||||||
  Rat   391 YLNTFEFMDKLGENLKAKLAQAKL 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IDH1NP_005887.2 PTZ00435 1..411 CDD:240417 394/409 (96%)
Idh1NP_113698.1 PTZ00435 1..411 CDD:240417 394/409 (96%)

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