DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13398 and dok1b

DIOPT Version :9

Sequence 1:NP_001260252.1 Gene:CG13398 / 34169 FlyBaseID:FBgn0032042 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_998253.1 Gene:dok1b / 406361 ZFINID:ZDB-GENE-040426-2063 Length:575 Species:Danio rerio


Alignment Length:471 Identity:106/471 - (22%)
Similarity:162/471 - (34%) Gaps:123/471 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RGHENVFRVRVAHLQPTPGTPIIRSGYLELTPRELIFQSPGCEP--IVWALQHLRRYGLNNDLFS 76
            |...|.|.|.|...:.:....:..:.:|......||.:.|..:.  ::|..:.|||||.:..:||
Zfish   145 REEVNEFLVTVQRTEASERCGLSGNYWLRANMDNLILKDPKTKKDLLIWPYKLLRRYGRDRVMFS 209

  Fly    77 FEAGRRCMSGPGIYTFRVHNAEQLYPMFQRYINAVNTDAFVQGERERVNSAHSV--------SVN 133
            |||||||.||||.:||......:::.:.:..|......|     .||..|..|:        .:.
Zfish   210 FEAGRRCESGPGNFTFETKQGNEIFHIVEESIREQKAQA-----EERHQSCPSLDSDCPALQQIR 269

  Fly   134 MGRTEGNNYLEPAPLMSRQLGNFHSEPSSTSASYPLQANDSQ-------------VDDSPPNLQS 185
            ...:|.|: .||    ....|.  |:|.|....:..:.||.:             |..:||  :|
Zfish   270 AAISEANS-REP----DGDSGG--SKPGSADGVFGRKENDGKNLKVRSLPEPPPPVGGTPP--RS 325

  Fly   186 PVLIPSAYLDQPLRALQDCCLEGTASDLLSTPPS-GNRLTS----RRRTMDLPPLESAPAPAPVL 245
            |  :|....:|   ..:...|....:|.:..||| |:.|.|    ..:.|.||.....||.....
Zfish   326 P--MPRGSKNQ---LDEQASLYSEPADSVRAPPSLGDCLYSDPVDSIKVMPLPNSRIRPAGEEGG 385

  Fly   246 SPNDAVH---MYANV-EALIFDLNNERCYENVNRLELPLLPREPISN-------QEPATPTSLAG 299
            |.|.::.   .|::: :.:..||     .:....|.|....|.|...       .||      .|
Zfish   386 SHNQSMKPDPFYSDIYDQISLDL-----IQKTMALGLDGRSRHPADGGPTEHIYDEP------EG 439

  Fly   300 SCGVNYIVLDL-------------------------DQPRSPVGPAGSSKAINGFGSGLSLISTP 339
            ..|.:..|:.|                         .||.....|.|                 |
Zfish   440 RAGSSQPVITLYDEARLDAHSWRNRAREESQCQEMAQQPLPMARPKG-----------------P 487

  Fly   340 AAVTAPVTPEAGTTLDVPPPPMQTQSLNSISADTGDTQAKKVTECSGTQGYSTIDFIRTYALNKS 404
            ..||||...:.......||||.|.:.    ||:..:..:.|        .|..::..|..|...:
Zfish   488 KPVTAPKPGKVSLGKKEPPPPPQIKG----SANLNNNNSSK--------RYDNMEAGRRDAGAGN 540

  Fly   405 STELPETVTHRQHSSH 420
            :.||...|:..|..|:
Zfish   541 NMELYSKVSRHQPPSN 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13398NP_001260252.1 PTB_FRS2 15..109 CDD:269913 29/95 (31%)
dok1bNP_998253.1 PH 5..114 CDD:278594
PH_DOK1,2,3 6..116 CDD:270195
PTB_DOK1_DOK2_DOK3 147..245 CDD:269914 30/97 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574611
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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