DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13398 and Frs3

DIOPT Version :9

Sequence 1:NP_001260252.1 Gene:CG13398 / 34169 FlyBaseID:FBgn0032042 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_001017382.2 Gene:Frs3 / 316213 RGDID:1310226 Length:493 Species:Rattus norvegicus


Alignment Length:535 Identity:125/535 - (23%)
Similarity:180/535 - (33%) Gaps:188/535 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RVRVAHLQPT---------PGTPIIRSGYLELTPRELIFQSPGCEPIVWALQHLRRYGLNNDLFS 76
            |..|.|..||         .|.. :.||.:|||..||:......|.:.|....|||||.:::|||
  Rat    10 RDSVPHNHPTKFKVTNVDDEGVE-LGSGVMELTQSELVLHLHQQEAVRWPYLCLRRYGYDSNLFS 73

  Fly    77 FEAGRRCMSGPGIYTFRVHNAEQLYPMFQRYI--NAVNTDAFVQGERERV---NSAHSVSVNMGR 136
            ||:||||.:|.||:.|:...||:::.:.|..:  |::|.      ..|.|   .::|...:::.|
  Rat    74 FESGRRCQTGQGIFAFKCSRAEEIFNLLQDLMQCNSINV------TEEPVIITRNSHPQELDLPR 132

  Fly   137 ----------TEGNNYLEPAPLMSRQLGNFHSEPSSTSASYPLQANDSQVDDSPPNLQSPVLIPS 191
                      :..:|.....|....:..:....||::|..:|          ||....:..||.|
  Rat   133 GSSQPTGYTVSSFSNGFPGCPGEGPRFSSAPRRPSTSSLRHP----------SPGEESTQTLIAS 187

  Fly   192 AYLDQPLRALQDCCLEGTASDLLSTPPSGNRLTSRRRTMDLPPLESAPAPAP------------- 243
               |:             .|......|:|..  .||....|.||.....|.|             
  Rat   188 ---DE-------------QSHTYVNTPTGEE--DRRSRHCLQPLPEGRVPFPPQTQVSDQRDPQV 234

  Fly   244 ---------VLSPNDAVHMYANVEAL--------IFDLNNE---------RC-YENVN------- 274
                     ||.|..|.......::|        :.:.|||         :| ||||:       
  Rat   235 FLQPGQVKFVLGPTPARRQVMKCQSLCPSMQDPPLHNNNNEGPSECPAQPKCTYENVSGGLQQGA 299

  Fly   275 --RL---------------------ELPLLPREPISNQEPATPTSLAGSCGVNYIVLDLDQPRSP 316
              ||                     .||.||  |:...:   ...|.|..|        |...|.
  Rat   300 GWRLSPEERGWSGLAHRRAALLHYENLPPLP--PVWESQ---VQQLGGEAG--------DDGDSK 351

  Fly   317 VGPAGSSKAINGFGSG---LSLISTPAAVTA----------PVTPEAGT----TLDV----PPPP 360
            .|...||   |||..|   .:.:..|.:..|          |:|...|:    ..|.    |.||
  Rat   352 DGLTPSS---NGFPDGEEDETPLQKPTSTRASARSHSSFPVPLTRRRGSPRVFNFDFRRPGPEPP 413

  Fly   361 MQTQSLNSISAD-----TGDTQAKKVTECSGTQG-----------YSTIDFIRTYALNKSSTELP 409
            .|   ||.|..:     |...:..:....||..|           |:.||..:|.|::.....||
  Rat   414 RQ---LNYIQVELKGWGTAHPKGPQNPSVSGAPGPTPHPARSSDSYAVIDLKKTVAMSNLQRALP 475

  Fly   410 E---TVTHRQHSSHD 421
            .   ||...:|:|.|
  Rat   476 RDDGTVRKTRHNSTD 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13398NP_001260252.1 PTB_FRS2 15..109 CDD:269913 36/98 (37%)
Frs3NP_001017382.2 PTB_FRS2 15..106 CDD:269913 34/91 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 125..205 16/107 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 338..414 20/86 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 426..493 16/65 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335296
Domainoid 1 1.000 68 1.000 Domainoid score I9512
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D223604at33208
OrthoFinder 1 1.000 - - FOG0002576
OrthoInspector 1 1.000 - - otm45265
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR21258
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.040

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