DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13398 and Frs2

DIOPT Version :9

Sequence 1:NP_001260252.1 Gene:CG13398 / 34169 FlyBaseID:FBgn0032042 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_001101567.2 Gene:Frs2 / 314850 RGDID:1308201 Length:508 Species:Rattus norvegicus


Alignment Length:566 Identity:126/566 - (22%)
Similarity:188/566 - (33%) Gaps:206/566 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MG-CITSSSKLNELRGHENVFRVRVAHLQPTPGTPIIRSGYLELTPRELIFQSPGCEPIVWALQH 64
            || |.:...|......|.|.|:|    :........:.||.:|||..|||..:...:.:.|....
  Rat     1 MGSCCSCPEKDTVPDNHRNKFKV----INVDDDGNELGSGVMELTDTELILYTRKRDSVKWHYLC 61

  Fly    65 LRRYGLNNDLFSFEAGRRCMSGPGIYTFRVHNAEQLYPMFQRYI--NAVNTDAFVQGERERVNSA 127
            |||||.:::|||||:||||.:|.||:.|:...||:|:.|.|..:  |::|    |..|.....::
  Rat    62 LRRYGYDSNLFSFESGRRCQTGQGIFAFKCARAEELFNMLQEIMQNNSIN----VVEEPVVERNS 122

  Fly   128 HSVSVNMGRTEGNNYLEPAPLMSRQ-----------LGNFHSEPSS--------------TSASY 167
            |...:.:.||...   ...|.:..|           .|:..|.|||              ..:::
  Rat   123 HQTELEVPRTPRT---PTTPGLGAQSLPNGYPRYPSFGDASSHPSSRHPSVGSARLPSVGEESTH 184

  Fly   168 PLQANDSQV-------------------------------------------DDSPPNLQSP--- 186
            ||...:.||                                           |..|..|..|   
  Rat   185 PLLVAEEQVHTYVNTTGVQEERKNRASVHIPPEARVSNAESNTPKEEPSNTEDRDPHVLLKPEGV 249

  Fly   187 --VLIPSAYLDQPLRALQDCCLEGTASDLLSTPPSGNRLT--------SRRRTMDLPPLESAPAP 241
              ||.|:....|.:...:   ||....|.:|  .||...|        ..||  |:||:      
  Rat   250 KFVLGPTPVQKQLMEKEK---LEQLGKDQVS--GSGASSTEWDTGYDSDERR--DVPPV------ 301

  Fly   242 APVLSPNDAVHMYANVEALIFDLNNERCYENVNRLELP--------------LLPREPISNQEPA 292
                                    |:..|||:|.|.:|              ....:.|:|....
  Rat   302 ------------------------NKLVYENINGLSIPSASGVRRGRLTSTSTSDTQNINNSAQR 342

  Fly   293 TPTSLAGSCGVNY--------------IVLDLDQPRSPVGPAGSSKAINGFGSGL----SLISTP 339
            .|..|      ||              :..|.|....|..|     ::||:.:.|    :.::| 
  Rat   343 RPALL------NYENLPSLPPVWEARKLSRDEDDNLGPKTP-----SLNGYHNNLDPMHNYVNT- 395

  Fly   340 AAVTAPV-------------TPEAGTTLDVPPPPMQTQSLNSI------SADTGDTQAKKV---- 381
            ..||.|.             ||.. ...|:..|.::.:.||.|      .:|:.:.|..|.    
  Rat   396 ENVTVPASAHKIDCSRRRDCTPTV-FNFDIRRPSLEHRQLNYIQVDLEGGSDSDNPQTPKTPTTP 459

  Fly   382 ---TECSGTQGYSTIDFIRTYALNKSSTELPE---TVTHRQHSSHD 421
               |....|:.|:.||..||.|::.....||.   |....:|:|.|
  Rat   460 LPQTPTRRTELYAVIDIERTAAMSNLQKALPRDDGTSRKTRHNSTD 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13398NP_001260252.1 PTB_FRS2 15..109 CDD:269913 36/95 (38%)
Frs2NP_001101567.2 PTB_FRS2 15..106 CDD:269913 36/94 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335306
Domainoid 1 1.000 68 1.000 Domainoid score I9512
eggNOG 1 0.900 - - E1_KOG4047
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D223604at33208
OrthoFinder 1 1.000 - - FOG0002576
OrthoInspector 1 1.000 - - otm45265
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21258
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5006
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.940

Return to query results.
Submit another query.