DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acp29AB and SFTPA2

DIOPT Version :9

Sequence 1:NP_523512.2 Gene:Acp29AB / 34162 FlyBaseID:FBgn0015583 Length:234 Species:Drosophila melanogaster
Sequence 2:XP_005270185.1 Gene:SFTPA2 / 729238 HGNCID:10799 Length:265 Species:Homo sapiens


Alignment Length:161 Identity:33/161 - (20%)
Similarity:62/161 - (38%) Gaps:28/161 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 AQMEIQLQPLKIIMRHHASNIKASNNIK---MRRFEKVGSRHFHIEKNLMQTWFEA-YVTCRKMN 143
            |.::.:||......||.....:.:.:::   |...|||.|      .|.....|:| ...|.:..
Human   118 AHLDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKVFS------SNGQSITFDAIQEACARAG 176

  Fly   144 GHLANIQDEMELDGILALAPN-NSY-WIDISKLVENG------GTFVSTLTGREPFFVKWKSNQD 200
            |.:|..::..|.:.|.:.... |:| ::.:::....|      ||.|:        :..|...:.
Human   177 GRIAVPRNPEENEAIASFVKKYNTYAYVGLTEGPSPGDFRYSDGTPVN--------YTNWYRGEP 233

  Fly   201 T-KKKNQCVYIYAKEMSYD-ECFEKKSFVCQ 229
            . :.|.|||.:|......| .|...:..:|:
Human   234 AGRGKEQCVEMYTDGQWNDRNCLYSRLTICE 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acp29ABNP_523512.2 CLECT 121..229 CDD:214480 22/118 (19%)
SFTPA2XP_005270185.1 Collagen 45..117 CDD:189968
CLECT_collectin_like 153..265 CDD:153061 27/126 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.