DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acp29AB and SFTPD

DIOPT Version :9

Sequence 1:NP_523512.2 Gene:Acp29AB / 34162 FlyBaseID:FBgn0015583 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_003010.4 Gene:SFTPD / 6441 HGNCID:10803 Length:375 Species:Homo sapiens


Alignment Length:153 Identity:32/153 - (20%)
Similarity:64/153 - (41%) Gaps:9/153 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 AQMEIQLQPLKIIMRHHASNIKASNNIKM-RRFEKVGSRHFHIEKNLMQTWFEAYVTCRKMNGHL 146
            |.:..|::.|:..::|..:.......::: ...:.||.:.|. ....::.:.||.:.|.:..|.|
Human   225 ASLRQQVEALQGQVQHLQAAFSQYKKVELFPNGQSVGEKIFK-TAGFVKPFTEAQLLCTQAGGQL 288

  Fly   147 ANIQDEMELDGI--LALAPNNSYWIDISKLVENGGTFVSTLTGREPFFVKWKSNQ--DTKKKNQC 207
            |:.:...|...:  |.:|.|.:.::.::. .:..|.|... ||....:..|...:  |......|
Human   289 ASPRSAAENAALQQLVVAKNEAAFLSMTD-SKTEGKFTYP-TGESLVYSNWAPGEPNDDGGSEDC 351

  Fly   208 VYIYAKEMSYDE-CFEKKSFVCQ 229
            |.|:......|. |.||:..||:
Human   352 VEIFTNGKWNDRACGEKRLVVCE 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acp29ABNP_523512.2 CLECT 121..229 CDD:214480 25/112 (22%)
SFTPDNP_003010.4 Collagen 46..98 CDD:189968
Collagen 130..201 CDD:189968
Surfac_D-trimer 224..269 CDD:286141 7/44 (16%)
CLECT_collectin_like 262..375 CDD:153061 26/116 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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