DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acp29AB and Clec10a

DIOPT Version :10

Sequence 1:NP_523512.2 Gene:Acp29AB / 34162 FlyBaseID:FBgn0015583 Length:234 Species:Drosophila melanogaster
Sequence 2:XP_008766090.1 Gene:Clec10a / 64195 RGDID:621158 Length:307 Species:Rattus norvegicus


Alignment Length:208 Identity:39/208 - (18%)
Similarity:75/208 - (36%) Gaps:75/208 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LALWNLWDLSGGQQDIPNGKATLPSPQTPQN------------------------TIDQIGINQN 50
            :|..|..:|...:::...|||.     .||:                        .|..|| :||
  Rat     3 MAYENFQNLGSEEKNQEAGKAA-----PPQSFLCNILSWTHLLLFSLGLSLLLLVVISVIG-SQN 61

  Fly    51 YWFTYNALKQN-ETLAIIDTMEMRIASSLLEFKA------QMEIQLQPLKIIMRHHASNIKASNN 108
                 :.|::: |||.  .|::...:::..|.:|      .::..:..||:.:..|...::|...
  Rat    62 -----SQLRRDLETLR--TTLDNTTSNTKAELQALASRGDSLQTGINSLKVEVDDHGQELQAGRG 119

  Fly   109 IKMRRFEKVGSRHFHIEKNLMQTWFEAYVTCRKMNGHLANIQDEMELDG---------ILALAPN 164
            :.    :||.|....:||. .||          :...|:.|.|.::..|         :.:|..|
  Rat   120 LS----QKVASLESTVEKK-EQT----------LRTDLSEITDRVQQLGKDLKTLTCQLASLKNN 169

  Fly   165 NS-------YWID 170
            .|       :|::
  Rat   170 GSAVACCPLHWME 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acp29ABNP_523512.2 CLECT 121..229 CDD:214480 12/66 (18%)
Clec10aXP_008766090.1 Lectin_N 5..166 CDD:461106 34/188 (18%)
CLECT_DC-SIGN_like 176..301 CDD:153060 1/7 (14%)

Return to query results.
Submit another query.