DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acp29AB and Clec9a

DIOPT Version :10

Sequence 1:NP_523512.2 Gene:Acp29AB / 34162 FlyBaseID:FBgn0015583 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_001102824.1 Gene:Clec9a / 502901 RGDID:1562513 Length:241 Species:Rattus norvegicus


Alignment Length:236 Identity:47/236 - (19%)
Similarity:83/236 - (35%) Gaps:41/236 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 QQDIPNGKATLPSPQ-----------TPQNTIDQIGINQNYWFTYNALKQNETLAIIDTMEMRIA 75
            |.|||..:|:...|.           |..:.:..:|:.....|.  .:|.::..:::  ||.|  
  Rat    11 QWDIPTSEASQKCPSLSKCPGTWCIVTVISCVVCVGLLAASIFL--GIKFSQVSSLV--MEQR-- 69

  Fly    76 SSLLEFKAQMEIQLQPLKIIMRHHASNIKASNNIKMRRFEKVGSRHFHIEKNLMQ---------- 130
                |...:.:..|..|....|:|...:| |....::|..:.||.......|.:|          
  Rat    70 ----ERLIRQDTALLNLTEWQRNHTLQLK-SCQASLQRSLRSGSNCNPCPPNWIQNGKSCYYAFD 129

  Fly   131 ---TWFEAYVTCRKMNGHLANIQDEMELD----GILALAPNNSYWIDISKLVENGGTFVSTLTGR 188
               ||..:..:|.|....|..|..:.|::    .|..|.....||:.:.:...:|..|..  .|.
  Rat   130 RWETWNNSKKSCLKEGDSLLQIDSKEEMEFINLSIWKLKGGYEYWVGVFQDGPSGSWFWE--DGS 192

  Fly   189 EPFFVKWKSNQDTKKKNQCVYIYAKEMSYDECFEKKSFVCQ 229
            .|......:::.......|.|:....:..|.|...|.|:|:
  Rat   193 SPLSDLLPTDRQLSASQICGYLKDHTLISDNCSNWKYFICE 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acp29ABNP_523512.2 CLECT 121..229 CDD:214480 23/124 (19%)
Clec9aNP_001102824.1 ITAM-like 5..10
CLECT_NK_receptors_like 113..234 CDD:153063 24/123 (20%)
Blue background indicates that the domain is not in the aligned region.

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